Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3191 ATGGCTTCCCGGAACCAGAACAGACCTCCGCGTAGCCCTTCCAATAAAAAGGGAGGTGGTGCTGAAGAACTTCAATCTGACAAGCGACGAAGGATTATAGGAACTGACAAAATGGAGCGTCAGGGACGAGGTAGGGCTCCGTTTGGTGCGGTCAACAACAAGGCAGAAGCCAGTGATGCTGGAAGTGTTGAGGGATCCGAATGCAGTACTGTTGATTTTACTAAAGAGGAGGTTGAAGCGTTGTTGAATGAGAAGATGAAGAAGGGGAATCCCTTCGATAGTAAGAAGAAGATAGAGCAGATGGGGGATCTGATTAAGCGGCTTAAGCTTTGTGTTCGGTGGTTTAAGAGAGTTGAAGAAGGGTATATCCAAGAGAAAGAAAAGCTTCAGAGTGATCTAGAATCTGCTCAGAAGAAATGCATTGACGCTGAAAATGAGATGAAAATGAAGATGAGAGAGCTGAATGAGGTTATATCTAATTTGAGGATGACAATTTCCTCTTTAGAAGAGAGAATTACAAAGGAAGAACGAGATAAATTGGAAGCTATTGACTGTTATAGAAAAGAAAAGGATGCCAGAAGTGTAGCTGAGCAGATGCAAGCTTCTCTTTCCACTGAGCTTGAGAAAGTTCGGGTTGAGAAATCAGCTGCTGAGAAGAAGGCTATTTCAAATGAGGACCTGTACAAGCGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCAGATCTTGAAACAACTAATGAGGCACATAAACGACTAGAAACAGAAAAATCAACTATTGTTGAGAACCTTAGCAATGTAAGAGGGCACAATAAGGCATTGCAGGAGCAGTTGTCATCTCTTAAGGCTTCACAAGATGAGGCTACAAAGCAGAAAGATATTTTAGCAAATGAACTCAAATGCCTTAGAGAAGAATTAAAGCAAATTAGAGATGATCGTGATCGTCAAAAGGGACAAGTACATTCTTTAACTGGAGAATTAGCAAAATATAAAGAATATACAGGGAAATCTTGTGCTCAATTGGATACCTTGACTTCTAAAACTAATGCTCTTGAGGAGACATGTACTTCTCAAAGGGAGCAAATGAATATGCTGCAGCAGCAGTTGATTGCTGAAAGGGAGAAGTTAAAGATGGCTGATTTATCTGTTTCAGAAACAAGAACAGTGTTTGAAGATCAAAAAAGAATTATAAATGAACTACAAGAGCGACTGGCAGAAAAAGAATGCCAAATAATTGAAGGGGAGAATTTAAGAAAAAAACTACACAACACTATCCTGGAACTAAAAGGAAATATTCGTGTGTTCTGCCGTGTCCGACCTCTGCTACCAGATGATGGTCATGGAACAGACATGGTTATTTCTTACCCCACGTCAACAGAAGGTCTCGGTCGGGGCATTGAATTGGTACAAAGCGGGCAGAAGTATCCTTTTCAATTTGACAAGGTGTTCAATCACGAGGCTTCTCAACGAGATGTTTTCACTGAGATATCGCAGCTGGTTCAAAGTGCCCTTGATGGTTACAAGGTATGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTACACAATGATGGGCAGACCTGATGCCTTTGAGCTGAAAGGACTGATACCACGTTCTCTAGAACAGATTTTCCATATTAGTCAGTCCTTGAAAGATCAGGGATGGAAGTACAAAATGCAGGCTTCAATACTTGAAATATATAATGAGACCATTAGGGATTTGTTATCACCAAATCGGTCAAGTGATCAAGCACGAACAGAAAATGGTGTTCTTGGAAAGCAGTACACTATTAAACACGATGCCAGTGGAAACACACATGTTTCAGACCTCAATATTGTGGATGTTTCCAGTGCAAGTGAGATTTCCTCCCTCTTGCAACAGGCTGCGCAAAGCAGGTCAGTAGGAAGAACACAAATGAATGAACAATCTTCACGAAGTCACTTTGTGTTCACTTTGCGCATATGTGGGTATAATGAGAAAACTGAACAACAAGTGCAAGGAGTGTTAAACCTAATTGATCTGGCTGGAAGTGAAAGACTTTCAAGAAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTGCCCTTTAGGAATTCAAAACTGACATACCTTCTGCAGCCATGCCTCGGTGGGGATTCAAAAACTCTGATGTTTGTGAACATCTCACCTGATCCATCTTCAGCTGGAGAGTCACTTTGCTCTCTTCGTTTTGCTGCCAGAGTCAATGCCTGCGAGATTGGCATTCCACGGCGTCAAACATCCACACGGTCCTTTGATTCTCGTTTGAGCTATGGCTAA 2391 0.4178 MASRNQNRPPRSPSNKKGGGAEELQSDKRRRIIGTDKMERQGRGRAPFGAVNNKAEASDAGSVEGSECSTVDFTKEEVEALLNEKMKKGNPFDSKKKIEQMGDLIKRLKLCVRWFKRVEEGYIQEKEKLQSDLESAQKKCIDAENEMKMKMRELNEVISNLRMTISSLEERITKEERDKLEAIDCYRKEKDARSVAEQMQASLSTELEKVRVEKSAAEKKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATKQKDILANELKCLREELKQIRDDRDRQKGQVHSLTGELAKYKEYTGKSCAQLDTLTSKTNALEETCTSQREQMNMLQQQLIAEREKLKMADLSVSETRTVFEDQKRIINELQERLAEKECQIIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGHGTDMVISYPTSTEGLGRGIELVQSGQKYPFQFDKVFNHEASQRDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAFELKGLIPRSLEQIFHISQSLKDQGWKYKMQASILEIYNETIRDLLSPNRSSDQARTENGVLGKQYTIKHDASGNTHVSDLNIVDVSSASEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGYNEKTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSAGESLCSLRFAARVNACEIGIPRRQTSTRSFDSRLSYG* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3191 796 Coils Coil 242 262 - -
Lja6g3191 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 773 IPR027417 -
Lja6g3191 796 SMART kinesin_4 435 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 MobiDBLite consensus disorder prediction 1 65 - -
Lja6g3191 796 MobiDBLite consensus disorder prediction 21 43 - -
Lja6g3191 796 Coils Coil 354 374 - -
Lja6g3191 796 PANTHER KINESIN-LIKE PROTEIN 3 796 - -
Lja6g3191 796 Coils Coil 200 220 - -
Lja6g3191 796 Coils Coil 119 178 - -
Lja6g3191 796 Coils Coil 277 325 - -
Lja6g3191 796 Coils Coil 396 423 - -
Lja6g3191 796 ProSitePatterns Kinesin motor domain signature. 675 686 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja6g3191 796 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 796 - -
Lja6g3191 796 CDD KISc_C_terminal 435 777 - -
Lja6g3191 796 ProSiteProfiles Kinesin motor domain profile. 437 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 Pfam Kinesin motor domain 443 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 Gene3D Kinesin motor domain 379 777 IPR036961 -
Lja6g3191 796 PRINTS Kinesin heavy chain signature 725 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 PRINTS Kinesin heavy chain signature 512 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 PRINTS Kinesin heavy chain signature 676 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g3191 796 PRINTS Kinesin heavy chain signature 645 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3191 Lja-Chr6 60358113 60364691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3191 346 787 Calmodulin-binding Proteins AT5G65930 36.142 2.08e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3191 K10405 - gmx:100818473 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3945 4 72412759 72418850 Lja6g3191 6 60358113 60364691 PCT