Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja6g3191 | ATGGCTTCCCGGAACCAGAACAGACCTCCGCGTAGCCCTTCCAATAAAAAGGGAGGTGGTGCTGAAGAACTTCAATCTGACAAGCGACGAAGGATTATAGGAACTGACAAAATGGAGCGTCAGGGACGAGGTAGGGCTCCGTTTGGTGCGGTCAACAACAAGGCAGAAGCCAGTGATGCTGGAAGTGTTGAGGGATCCGAATGCAGTACTGTTGATTTTACTAAAGAGGAGGTTGAAGCGTTGTTGAATGAGAAGATGAAGAAGGGGAATCCCTTCGATAGTAAGAAGAAGATAGAGCAGATGGGGGATCTGATTAAGCGGCTTAAGCTTTGTGTTCGGTGGTTTAAGAGAGTTGAAGAAGGGTATATCCAAGAGAAAGAAAAGCTTCAGAGTGATCTAGAATCTGCTCAGAAGAAATGCATTGACGCTGAAAATGAGATGAAAATGAAGATGAGAGAGCTGAATGAGGTTATATCTAATTTGAGGATGACAATTTCCTCTTTAGAAGAGAGAATTACAAAGGAAGAACGAGATAAATTGGAAGCTATTGACTGTTATAGAAAAGAAAAGGATGCCAGAAGTGTAGCTGAGCAGATGCAAGCTTCTCTTTCCACTGAGCTTGAGAAAGTTCGGGTTGAGAAATCAGCTGCTGAGAAGAAGGCTATTTCAAATGAGGACCTGTACAAGCGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCAGATCTTGAAACAACTAATGAGGCACATAAACGACTAGAAACAGAAAAATCAACTATTGTTGAGAACCTTAGCAATGTAAGAGGGCACAATAAGGCATTGCAGGAGCAGTTGTCATCTCTTAAGGCTTCACAAGATGAGGCTACAAAGCAGAAAGATATTTTAGCAAATGAACTCAAATGCCTTAGAGAAGAATTAAAGCAAATTAGAGATGATCGTGATCGTCAAAAGGGACAAGTACATTCTTTAACTGGAGAATTAGCAAAATATAAAGAATATACAGGGAAATCTTGTGCTCAATTGGATACCTTGACTTCTAAAACTAATGCTCTTGAGGAGACATGTACTTCTCAAAGGGAGCAAATGAATATGCTGCAGCAGCAGTTGATTGCTGAAAGGGAGAAGTTAAAGATGGCTGATTTATCTGTTTCAGAAACAAGAACAGTGTTTGAAGATCAAAAAAGAATTATAAATGAACTACAAGAGCGACTGGCAGAAAAAGAATGCCAAATAATTGAAGGGGAGAATTTAAGAAAAAAACTACACAACACTATCCTGGAACTAAAAGGAAATATTCGTGTGTTCTGCCGTGTCCGACCTCTGCTACCAGATGATGGTCATGGAACAGACATGGTTATTTCTTACCCCACGTCAACAGAAGGTCTCGGTCGGGGCATTGAATTGGTACAAAGCGGGCAGAAGTATCCTTTTCAATTTGACAAGGTGTTCAATCACGAGGCTTCTCAACGAGATGTTTTCACTGAGATATCGCAGCTGGTTCAAAGTGCCCTTGATGGTTACAAGGTATGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTACACAATGATGGGCAGACCTGATGCCTTTGAGCTGAAAGGACTGATACCACGTTCTCTAGAACAGATTTTCCATATTAGTCAGTCCTTGAAAGATCAGGGATGGAAGTACAAAATGCAGGCTTCAATACTTGAAATATATAATGAGACCATTAGGGATTTGTTATCACCAAATCGGTCAAGTGATCAAGCACGAACAGAAAATGGTGTTCTTGGAAAGCAGTACACTATTAAACACGATGCCAGTGGAAACACACATGTTTCAGACCTCAATATTGTGGATGTTTCCAGTGCAAGTGAGATTTCCTCCCTCTTGCAACAGGCTGCGCAAAGCAGGTCAGTAGGAAGAACACAAATGAATGAACAATCTTCACGAAGTCACTTTGTGTTCACTTTGCGCATATGTGGGTATAATGAGAAAACTGAACAACAAGTGCAAGGAGTGTTAAACCTAATTGATCTGGCTGGAAGTGAAAGACTTTCAAGAAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTGCCCTTTAGGAATTCAAAACTGACATACCTTCTGCAGCCATGCCTCGGTGGGGATTCAAAAACTCTGATGTTTGTGAACATCTCACCTGATCCATCTTCAGCTGGAGAGTCACTTTGCTCTCTTCGTTTTGCTGCCAGAGTCAATGCCTGCGAGATTGGCATTCCACGGCGTCAAACATCCACACGGTCCTTTGATTCTCGTTTGAGCTATGGCTAA | 2391 | 0.4178 | MASRNQNRPPRSPSNKKGGGAEELQSDKRRRIIGTDKMERQGRGRAPFGAVNNKAEASDAGSVEGSECSTVDFTKEEVEALLNEKMKKGNPFDSKKKIEQMGDLIKRLKLCVRWFKRVEEGYIQEKEKLQSDLESAQKKCIDAENEMKMKMRELNEVISNLRMTISSLEERITKEERDKLEAIDCYRKEKDARSVAEQMQASLSTELEKVRVEKSAAEKKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATKQKDILANELKCLREELKQIRDDRDRQKGQVHSLTGELAKYKEYTGKSCAQLDTLTSKTNALEETCTSQREQMNMLQQQLIAEREKLKMADLSVSETRTVFEDQKRIINELQERLAEKECQIIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDGHGTDMVISYPTSTEGLGRGIELVQSGQKYPFQFDKVFNHEASQRDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAFELKGLIPRSLEQIFHISQSLKDQGWKYKMQASILEIYNETIRDLLSPNRSSDQARTENGVLGKQYTIKHDASGNTHVSDLNIVDVSSASEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGYNEKTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSAGESLCSLRFAARVNACEIGIPRRQTSTRSFDSRLSYG* | 797 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja6g3191 | 796 | Coils | Coil | 242 | 262 | - | - | |
Lja6g3191 | 796 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 397 | 773 | IPR027417 | - | |
Lja6g3191 | 796 | SMART | kinesin_4 | 435 | 783 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Lja6g3191 | 796 | MobiDBLite | consensus disorder prediction | 21 | 43 | - | - | |
Lja6g3191 | 796 | Coils | Coil | 354 | 374 | - | - | |
Lja6g3191 | 796 | PANTHER | KINESIN-LIKE PROTEIN | 3 | 796 | - | - | |
Lja6g3191 | 796 | Coils | Coil | 200 | 220 | - | - | |
Lja6g3191 | 796 | Coils | Coil | 119 | 178 | - | - | |
Lja6g3191 | 796 | Coils | Coil | 277 | 325 | - | - | |
Lja6g3191 | 796 | Coils | Coil | 396 | 423 | - | - | |
Lja6g3191 | 796 | ProSitePatterns | Kinesin motor domain signature. | 675 | 686 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Lja6g3191 | 796 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 3 | 796 | - | - | |
Lja6g3191 | 796 | CDD | KISc_C_terminal | 435 | 777 | - | - | |
Lja6g3191 | 796 | ProSiteProfiles | Kinesin motor domain profile. | 437 | 775 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | Pfam | Kinesin motor domain | 443 | 773 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | Gene3D | Kinesin motor domain | 379 | 777 | IPR036961 | - | |
Lja6g3191 | 796 | PRINTS | Kinesin heavy chain signature | 725 | 746 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | PRINTS | Kinesin heavy chain signature | 512 | 533 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | PRINTS | Kinesin heavy chain signature | 676 | 694 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lja6g3191 | 796 | PRINTS | Kinesin heavy chain signature | 645 | 662 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja6g3191 | Lja-Chr6 | 60358113 | 60364691 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja6g3191 | 346 | 787 | Calmodulin-binding Proteins | AT5G65930 | 36.142 | 2.08e-77 | 271 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja6g3191 | K10405 | - | gmx:100818473 | 1272.69 |