Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3190 ATGGCACAGAAGCAGAAGCGCCCTTCTCCTCTCGAAGATCCACCCACCGCGTCTTCCTCCTCCGAATCAGAGGAGGAAGATGACCAACCTCTCTCTCAAGTAAAACACGCAGCAGCAGAAGAAGAAGAACTTTCCTCAGAAGAAGAAGGTTCCTCTGAGGAGGAGGAGGAGGATGAAACCACCGCTCCAGCCCCTCCGGCAGCCACAACCTCCCACACCAAACCTCCTCAACCCGAACCCGAATCCGATTCCGCCACCCAATCCGATTCTGAGTCCGACACCGACTCCGACCAGGCCCCCTCCGCATCCGCTCCCACTCCTAACCCTAAAGTCAAACCCCTCGCCACCAAGCCCATGGACCAGACCCAGACCCACAAGCCCAAGGCTCAACCCTCCCCGGCTCCGGCCAAATCGGCAGCCAAGCGCGCCGCCGAGAGCAATGCCAACGCCGGAGACTCCAAACGGGCTAAGAAGAAGGCAGTTGACTCGGCCCCCGCCGCCGCCGCTGGTTCCGATGAGGAGATGGAGGAGGACGGGAAGAAGTCCGGGAACGACTCCAAGAAGCAGTTTACGAGATTGTGGTCCGATGAGGATGAGATCGCCATTCTCAAGGGGCTTGCTGATTTCATTTCGAAAACTGGGAATGACCCGTTGAAGTACCCTGATGCTTTTTACGATTTCGTTATCAGGTCGCTTCAAGCTGATGCTACCCGCACTCAGGTGAAGGATAAGGTTCGAAGGCTGAAGAAGAAGTTTCAGACCCTTGCAGGCAAAGGGAAGAATGGAGAGACCCCCAAATTCCCCAAAGTCCATGATCAGAAAACTTTTGAATTGGCCAAGAAGGTATGGGGAAGTGGAGCCAATGAAGCAGCAGCCGCGGAAGAGAAGCCGAAGGCTAATGGCAAACCTGCAAAGAGTCCCAAGAAGGAAGCCACTAGTAGCAGCAAGAATGTGGCTTCTTCTGCAAAGAAAGCGAAAGGCGAAGCTAGACAGGAACCACCACCACCGGAATCCGACATGCAAGTGGTGATTGTGAAGGAATCTGCTGGAAAGGTGGTGGACACTGATGTGAAGGCTGATACAAGTGTGCTTTTGAGTGAAATGTTTCGTTACGGTGTGACTGGGCTGAATGAGGATGTGGTGAAGAAGGGATTGGAGTTAATTGGAGCATCAAAGAGGGCCGAGTTGGATGGAAGGTGGAAGAAGATACAGGTTGCGGAGCTGGAGCTGTTTGCTAAGCGTGCTCAACTGATTGACGAGCAGACTAGGTTGATTTTGGAGGCGTTCAAGTCATCAAAGAATTAG 1305 0.5356 MAQKQKRPSPLEDPPTASSSSESEEEDDQPLSQVKHAAAEEEELSSEEEGSSEEEEEDETTAPAPPAATTSHTKPPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQTQTHKPKAQPSPAPAKSAAKRAAESNANAGDSKRAKKKAVDSAPAAAAGSDEEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKFPKVHDQKTFELAKKVWGSGANEAAAAEEKPKANGKPAKSPKKEATSSSKNVASSAKKAKGEARQEPPPPESDMQVVIVKESAGKVVDTDVKADTSVLLSEMFRYGVTGLNEDVVKKGLELIGASKRAELDGRWKKIQVAELELFAKRAQLIDEQTRLILEAFKSSKN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3190 434 PANTHER STOREKEEPER PROTEIN-LIKE 10 433 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 1 190 - -
Lja6g3190 434 Pfam Protein of unknown function, DUF573 190 284 IPR007592 GO:0006355
Lja6g3190 434 Coils Coil 37 57 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 43 61 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 287 340 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 252 271 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 307 321 - -
Lja6g3190 434 PANTHER BNAANNG10740D PROTEIN-RELATED 10 433 IPR007592 GO:0006355
Lja6g3190 434 MobiDBLite consensus disorder prediction 173 190 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 64 105 - -
Lja6g3190 434 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3190 Lja-Chr6 60352270 60353954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3190 110 431 GeBP Transcription Factor Family AT4G25210 32.827 1.01e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lja6g3190 DUF573 6.7e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3190 - - lja:Lj0g3v0205169.1 442.965