Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3173 ATGAGATTCCTCCTCACTTTCTTCCTCTTTTGCTTCATCACCTCACACACTCTCTCTGCATCAGACACCTTAACCGCAACACAAACTCTCAAAACCAACCAGACCCTCCAATCCTCCAACAACGTTTTCATCTTCGGATTCTTCCCCGGCAGCACCAATCCAAACTCATACTATCTAGGCATATGGTACAAGGATTTAGGTTACAGAACAGTAGTTTGGGTCGCAAACAGAGACAACCCACTTGAAAACTCCACAGGATTTCTCAGCATAGAAAATGGAAACATCATGGTTCTTGCCAACTCATCTGGAAACTCAGTTTGGTCTACAAATCAAACCAAATCTACTAGCAACCAAGTTCTTCAGCTTCTGGATAATGGCAACTTAGTTCTCAGAGAAGAAGCTTCCCCTGCTACTTATCTATGGCAGAGCTTTGATCACCCAACAGACACGTTGTTATCAGAAATGAAGATGGGTTGGAACCTGGACAAAGGAACAGAGGATCACCTAACATCGTGGAGGGACACCGATCAAGACCCTTCAACTGGAGACTACACATTCAAGATTGATTTCCAAGGACTCCCAGAAATTTTCCTGCGGAAAAATCAGACTATAAGATATAGAAGCGGGCCTTGGAATGGTGATAGATTCAGCGGGGTACCAGAGATGGAGCCAGATACAGATTCTATTGTGTTCAATTTCTCTGTAGATCAACATAGTGTGTATTACTCGTTCCATGTTGGAAATAAATCGATTTTTTCGAGGCTAATTGTTACTTCTGGTGGTGAACTTCAGCGTCTTACATGGGTTCCTAGCACACAGAGCTGGAACAAGTTCTGGTTTGCACCGAAAGATCAGTGTGATAGTTACAGAATGTGTGGTCCTTATGGTATCTGTGATGCGAATGCTTCACCGGTATGCAAGTGTTTGAGCGGGTTCAGCCCGAAGAATCTGCAGGCTTGGAATTTGAGAGATGGATCTGATGGGTGTGTGAGGAACCACAATTTGAGTTGTGGGAGTGATAAGTTTTTGCATATGGAGGATGTGAAGTTGCCTGAGACTAGCAAGGTGTTTGTGAATAGGAGCATGGATCTTGTGGAGTGTGAGGATTTGTGTAGAAGGAACTGTTCTTGTACTGGTTATGCTAACATTGAGGTTACCAATGGAGGATCTGGTTGTGTGATGTGGATTGGTGAACTTGTTGATATGAGGCAGTATCCTGATGGAGGGCAAGATCTCTATGTCAGATTAGCAGCTTCTGATGTAGATGACTCAGGATCTGCTGTCAGCTCTCACAAGAAGAAAAATGATAGTGCTAGGATTGCAGGAATCACAATATCTGCAGTTGTTGTGATTTTGGGATTGGGTTACCTTTTAATTAGGAATAAGAAATTGCTAAGTAGATTCAATGGGACCACAAACCACAGAGGTACTCTCCAAAGAAGTAGGGATTTGCTAATGAATGAGGTGGTAATTTCAGCTAATAGAGACAGAGAAAAGTCAGGAGAAAGGAATATGGATGAACTAGAGTTGCCATTGTTTGATATTAATACCATAACAATGGCTACAAACAACTTCAGTGAAGCAAATAAACTTGGTGAAGGAGGATTTGGTATTGTTTACAAGGGCAGATTAATTGAAGGCCAAGAAATTGCTGTCAAGAGGTTGTCAAAGAATTCTGGGCAAGGAACCGAAGAATTCAAGAATGAGGTTAAGTTAATTGTCAATCTTCAACATCGAAATCTTGTCCGGTTATTTGGTTGCTGCATTGAGATGGATGAAAAGCTGTTGGTTTATGAGTACATGGAGAATAGAAGTCTTGATTCCTTTTTATTTGACAAGACCAGAAAACACTTACTAGATTGGAAGATTCGGTTCAACATTATATGTGGAATAGCTAGAGGACTTCTTTACCTGCATCATGATTCTAGATTCAGGATTATCCATAGGGATCTCAAGACAAGCAACATTCTACTTGACAGTGAAATGAACCCGAAAATATCAGATTTTGGGATGGCTAGAATTTTTGGCACAAATCAGACTGAAGCAAATACACTCAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGGAACTTCTCAGTGAAGTCTGATGTTTTTAGCTTTGGAGTTCTTGTGCTAGAGATCATAACTGGGAAGAAGAACAGAGGATTCTATTACTCAAACGAAGATAAGAATCTTTTAGGGAATGCTTGGAGGCAGTGGGGAGAAGGCAGTGCATTAGAACTTATTGATCCCTCAATTAGCGATTCATATTCAACCTCAGAAGTTCTTAGATGCATTCATATTGGACTCTTGTGTGTCCAAGAACGTGCAGAGGATAGGCCTACAATGTCTTCACTGATCTTGATGTTGAACAGTGAAGCTCCTCTAATACCACAACCCAGAAACCCTGGGTTTTCCCTAGGAAAGAATCCTCCAGAGACTGATTCTTCTTCAAGTAAGCAAGAGGAACCATGGAGTGTGAACCAAGTCACAATCACATTGCTAGATGCAAGATAA 2535 0.4138 MRFLLTFFLFCFITSHTLSASDTLTATQTLKTNQTLQSSNNVFIFGFFPGSTNPNSYYLGIWYKDLGYRTVVWVANRDNPLENSTGFLSIENGNIMVLANSSGNSVWSTNQTKSTSNQVLQLLDNGNLVLREEASPATYLWQSFDHPTDTLLSEMKMGWNLDKGTEDHLTSWRDTDQDPSTGDYTFKIDFQGLPEIFLRKNQTIRYRSGPWNGDRFSGVPEMEPDTDSIVFNFSVDQHSVYYSFHVGNKSIFSRLIVTSGGELQRLTWVPSTQSWNKFWFAPKDQCDSYRMCGPYGICDANASPVCKCLSGFSPKNLQAWNLRDGSDGCVRNHNLSCGSDKFLHMEDVKLPETSKVFVNRSMDLVECEDLCRRNCSCTGYANIEVTNGGSGCVMWIGELVDMRQYPDGGQDLYVRLAASDVDDSGSAVSSHKKKNDSARIAGITISAVVVILGLGYLLIRNKKLLSRFNGTTNHRGTLQRSRDLLMNEVVISANRDREKSGERNMDELELPLFDINTITMATNNFSEANKLGEGGFGIVYKGRLIEGQEIAVKRLSKNSGQGTEEFKNEVKLIVNLQHRNLVRLFGCCIEMDEKLLVYEYMENRSLDSFLFDKTRKHLLDWKIRFNIICGIARGLLYLHHDSRFRIIHRDLKTSNILLDSEMNPKISDFGMARIFGTNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNEDKNLLGNAWRQWGEGSALELIDPSISDSYSTSEVLRCIHIGLLCVQERAEDRPTMSSLILMLNSEAPLIPQPRNPGFSLGKNPPETDSSSSKQEEPWSVNQVTITLLDAR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3173 844 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Lja6g3173 844 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3173 844 MobiDBLite consensus disorder prediction 806 836 - -
Lja6g3173 844 SUPERFAMILY Protein kinase-like (PK-like) 510 825 IPR011009 -
Lja6g3173 844 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Lja6g3173 844 Pfam Domain of unknown function (DUF3403) 799 844 IPR021820 GO:0004674
Lja6g3173 844 CDD STKc_IRAK 531 797 - -
Lja6g3173 844 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Lja6g3173 844 Gene3D Transferase(Phosphotransferase) domain 1 601 801 - -
Lja6g3173 844 CDD B_lectin 27 147 IPR001480 -
Lja6g3173 844 PANTHER - 8 843 - -
Lja6g3173 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lja6g3173 844 Pfam Protein tyrosine and serine/threonine kinase 528 793 IPR001245 GO:0004672|GO:0006468
Lja6g3173 844 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Lja6g3173 844 SMART blect_4 27 147 IPR001480 -
Lja6g3173 844 Gene3D - 15 145 IPR036426 -
Lja6g3173 844 Pfam D-mannose binding lectin 70 173 IPR001480 -
Lja6g3173 844 MobiDBLite consensus disorder prediction 815 836 - -
Lja6g3173 844 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Lja6g3173 844 CDD PAN_AP_plant 333 417 - -
Lja6g3173 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 213 IPR036426 -
Lja6g3173 844 Pfam Receptor serine/threonine kinase 479 513 IPR022126 GO:0004674
Lja6g3173 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Lja6g3173 844 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 843 - -
Lja6g3173 844 SMART ntp_6 337 416 IPR003609 -
Lja6g3173 844 Pfam PAN-like domain 337 402 IPR003609 -
Lja6g3173 844 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3173 Lja-Chr6 60241331 60260268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3173 513 844 Receptor kinase-like Gene Family AT4G11530 58.754 1.12e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja6g3173 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3173 - - gmx:100802437 1258.82