Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3157 ATGGATAACTCAACGATGGCTCTGCTAAACACATCAGATAAATCAATAGTTTGCTACACACCAACCATGACAACAACAAATGGTGTGTGGCAGGGAGACAACCCTTTAGAATTCTCCCTCCCTCTCTTCATCTTGCAATTAACGTTAGTTGTTGTTGCCACACGTTTATTTGTTTTCATCCTCAAGCCCTTTCACCAACCTCGCGTCATTGCTGAAATCATGGGTGGATTGCTTTTAGGCCCATCAGTGCTAGGTAGAAATGAAAAATTTGCCGATGCAGTATTCCCTCTAAAAAGTGCAATGGTGCTGGAAACAATGGCAAACATAGGCCTCATCTACTTCCTCTTCCTAGTTGGGTTAGAGATGGACATGTCAATTGTCAAACGCACAGGGAAAAAGGCAGTGTTCATAGCTGTTGGTGGCATGGTATTGCCCTTCATTGTTGGTGTTGGATCCTCCTTTATTTTAGCTGCTGAAGACAAGAACACAAGCAAAAGCGGCTATGTCGTCTATCTCGGTATAGTTTTATCCGCCACCGCCTTCCCGGTTCTTGCTCGCATGCTCGCTGAGCTCAAGCTTGTCAGCACAGAGCTTGGAAGGCTTGCCCTCTCAACATCACTCATCAATGATGTGTGTGCATGGATTTTGCTTGCTCTGGCTATTGCTTTATCAGAGCCAAGTACTAACTCCATGGTCTCAGTTTGGGTTGTGTTGTCAAACATTGTTTTCGTTGCTTTCTGCTTTCTTGTTGTTAGGCCAGCAGTGACATGGTTGATCAAGAGAACTCCAGAAGGAAAACCCTTCAGTGAGTTCCAAATATGTGTTGTGCTCACTGGTGTTATGATCTCAGCTTTCATCACAGATGTTCTAGGAACACATTCTGTTTTTGGAGCTTTTGTGTATGGCTTGGTGATTCCAAATGGCCCGCTTGGAGCTGCTATAATAGAAAAGCTAGAAGACTTTGTTTCCGGGCTTTTACTCCCTCTCTTTTATGCAATTAGTGGGCTTAAGACTGATGTCACCTTAATCAGTGGCACTTCTGCATGGTCATTTACAGTCATGGTGATTCCTCTTGCTTTCTTAGGCAAGATCCTTGGGACTCTTATTATTTCACTCCTTTTCCAGATACCAACTCGTGATGGAGTTGTTCTTGGTTTACTTATGAACACCAAAGGCCTTATTGAAATGATTGTGCTCAATATTGGGAGGGAACAAAAGGTCTTGGGGGATGAAGTGTTCTCAATTATGGTTCTTGTAACTCTTATAATGACAGCAGTCATTTCACCTATTGTAACATTGATCTACAAGCCAAGAAAAAGGCTCATACCTTATAAGAAGAGATCAGTGCAAAGTTCAAGACTTGATGCAGAGTTAAGGGTGCTGGTGTCTATCCACACCCCAAGAAATGTCCCAACAGTGATCAACCTCCTTGAAGCAACACACCCCAACAAAAGATCTCCCATATGTGCTTATGTTCTTCACCTAGTTGAGCTCACAGGAAGAGCTTCTGCCATGCTTGCTGTCCATGCTAACAGACAATCAGGAGGACCAGCACTCAACAAAACACAAGCACAAACAGACCAAATTATAACAGCATTTCAGAATTTCCAGGAACATGTTGGCTATGTCTCAGTGCAGCCCTTAACAGCAATCTCCCCTTACTCCACAATGCATGAAGACATATGCAATTTGGCAGAGGAGAAAAGGGTGGCTGTCATCATCATTCCTTTCCACAAACAACAAACAGTTGATGGAGACATGCAGGACACAAACCCTGCATTCAGAATGGTGAACCACAATTTGTTACAGAACTCTCCTTGCTCAGTTGGGATACTTGTGGACAGAGGACTAAACGGTTCGAACCGGTTAACCGCGAATCAACAACCTCATCAGGTGGCAGTTTTGTACTTTGGAGGACCAGATGATAGAGAGGCATTGTCCTATGGATGGAGAATGTCAAGGCATCCAAGGGTTCGCCTGACTGTGATGCATTTCATTCCAAGCAAGGAAAATGAGACTAATTTAGAGGAGGATCAAATAAAAATTGGGAAGGATAACTTAATAGATGAGGAGTACATTAAAGAGTTCAGGAAGGTAACTGCAAATGATGAATCAATTGTTTACATGGACAAAGTTGTGAACAATGGGGAGGAAACAGTATCAGCAATAAGAGCAATGAACAATGTGAATGACTTGTTTATAGTTGGGAGAGGTCAAGGGACATGTTCACCATTAACAAATGGACTCACAGATTGGAGTGAGTGTCCTGAGTTGGGAGCCATTGGAGATTTGTTAGCTTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGATGCATCAGTATGTTGGGCTAGGGCCAAATGGTGAGGATGTTTATGTGACAGAGAGACCGTGGCAAACAAATGAAAACCATGCCATGAAACAACAACAACATATGGCAAGATATTCGTCAGTGCAATGGGGGCCAACTCTTTTGTGA 2481 0.4309 MDNSTMALLNTSDKSIVCYTPTMTTTNGVWQGDNPLEFSLPLFILQLTLVVVATRLFVFILKPFHQPRVIAEIMGGLLLGPSVLGRNEKFADAVFPLKSAMVLETMANIGLIYFLFLVGLEMDMSIVKRTGKKAVFIAVGGMVLPFIVGVGSSFILAAEDKNTSKSGYVVYLGIVLSATAFPVLARMLAELKLVSTELGRLALSTSLINDVCAWILLALAIALSEPSTNSMVSVWVVLSNIVFVAFCFLVVRPAVTWLIKRTPEGKPFSEFQICVVLTGVMISAFITDVLGTHSVFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTDVTLISGTSAWSFTVMVIPLAFLGKILGTLIISLLFQIPTRDGVVLGLLMNTKGLIEMIVLNIGREQKVLGDEVFSIMVLVTLIMTAVISPIVTLIYKPRKRLIPYKKRSVQSSRLDAELRVLVSIHTPRNVPTVINLLEATHPNKRSPICAYVLHLVELTGRASAMLAVHANRQSGGPALNKTQAQTDQIITAFQNFQEHVGYVSVQPLTAISPYSTMHEDICNLAEEKRVAVIIIPFHKQQTVDGDMQDTNPAFRMVNHNLLQNSPCSVGILVDRGLNGSNRLTANQQPHQVAVLYFGGPDDREALSYGWRMSRHPRVRLTVMHFIPSKENETNLEEDQIKIGKDNLIDEEYIKEFRKVTANDESIVYMDKVVNNGEETVSAIRAMNNVNDLFIVGRGQGTCSPLTNGLTDWSECPELGAIGDLLASSDFETTASVLVMHQYVGLGPNGEDVYVTERPWQTNENHAMKQQQHMARYSSVQWGPTLL* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3157 826 Pfam Sodium/hydrogen exchanger family 50 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g3157 826 Gene3D - 453 753 - -
Lja6g3157 826 Gene3D - 42 441 IPR038770 -
Lja6g3157 826 PANTHER CATION/H + ANTIPORTER 10 811 - -
Lja6g3157 826 PANTHER CATION/H+ EXCHANGER 3 10 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3157 Lja-Chr6 60133195 60136482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3157 11 803 Antiporter Super Family AT2G13620 63.761 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3157 - - gmx:100800514 1300.42