Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3151 ATGGAGGAGGTTGGTTTTTCATTTTGTTTAGTTAATTTTGGTTTGAGAATCATCTTGTTATTCAGTTTTGGAATTGGGTTAGAGAGAGAAGTGGCATCTACAGCCATTTGTGGAATTATCCACTCAATATTTGGTGGCCAGCCTTTGTTGATTTCAGGAGTTGCTGAACCAACTGTTATAATGTATACATATTTATTCAATTTCTGCAAAAGCACTCCACAACTGGGTGCTAAGCTCTTTCTCGCTTGGGCTGGTTGGGTTTGTATTTGGACAGCGCTCTTGTTAGTTCTGCTTGCAATTTTTAACGCTTGCACAATTATCTCTAGGTTTACAAGAGTAGCATCTGAATTATTTGGCATGCTAATGATGAGCATAGACCTTCAATTAAGAAGGTGTATGAGAGAAGAAACAAGAGGAAAGTCACAGCTTAGTGGACTGATTGCCGAGTTTAGAACACCCGAGAATGAAGATCCTTCAGCAAAGCAATTTCGTTTCCAATGGTGGTACACGAACGGATTGCTAGCAATCATTTTCGCTTATGGACTACTTGTCACGGCCCTTAAAAGCAGAAAAGCAAGAACATGGAGATACGGAACAGTATCTTATATGCCACCTGACAGACTTCCAGAGGGTGTACCTAGAAGGTTGTTATGTCCACTTCCCTGGGAACCTGCATCTCTCTATCACTGGACAGTAGTCAAGGCAAGTCCTAAAATCCATGTAACAGTGACTAAAAATTGCAGGATATGGGGAAGGCTACTTTTGAAGTTTATATTTGAATCAGGGACGATGAAGCATCGACTTTTCCTTTTCTTGTTTGTAGGTAGATTTGATACCGCGCATGCTGTAGCGAGATTTGATGTGAAAGGGTATGTAGCTAGCTTTGGGAATCCTGATTGGGCAAGAACTCATCCAGTTGCTACCTCCACTGCTCCAACTGTTTTGGCTCTCCTCAGTGCTGGTGCCACTTGTGTTGGTAAAACTGTCATGGATGAAATGGCTTACAGGTCTGTGATTCACGGCAGGAACATCAGGTTGTCTCTCCTACAATGTATTCAAGGGTTAAAGGACCTATGTGCTTCTGGACTTGAACAGACTATGTCTAATGTCTATCCATGTAGGCATATATATACTTGA 1137 0.416 MEEVGFSFCLVNFGLRIILLFSFGIGLEREVASTAICGIIHSIFGGQPLLISGVAEPTVIMYTYLFNFCKSTPQLGAKLFLAWAGWVCIWTALLLVLLAIFNACTIISRFTRVASELFGMLMMSIDLQLRRCMREETRGKSQLSGLIAEFRTPENEDPSAKQFRFQWWYTNGLLAIIFAYGLLVTALKSRKARTWRYGTVSYMPPDRLPEGVPRRLLCPLPWEPASLYHWTVVKASPKIHVTVTKNCRIWGRLLLKFIFESGTMKHRLFLFLFVGRFDTAHAVARFDVKGYVASFGNPDWARTHPVATSTAPTVLALLSAGATCVGKTVMDEMAYRSVIHGRNIRLSLLQCIQGLKDLCASGLEQTMSNVYPCRHIYT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3151 378 PANTHER ANION EXCHANGE PROTEIN 30 200 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lja6g3151 378 Gene3D Amidase signature (AS) domain 284 346 IPR036928 -
Lja6g3151 378 PANTHER BORON TRANSPORTER-LIKE PROTEIN 30 200 - -
Lja6g3151 378 PANTHER BORON TRANSPORTER-LIKE PROTEIN 200 242 - -
Lja6g3151 378 Pfam HCO3- transporter family 25 123 IPR011531 GO:0006820|GO:0016021
Lja6g3151 378 SUPERFAMILY Amidase signature (AS) enzymes 286 337 IPR036928 -
Lja6g3151 378 PANTHER ANION EXCHANGE PROTEIN 200 242 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3151 Lja-Chr6 60103701 60108659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3151 10 239 Antiporters AT4G32510 54.183 9.72e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3151 K24194 - gmx:100792745 290.426