Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3133 ATGCAGAGGAGATCGAACAGTATGACGAGGGAGAAGCGAGGGTTGGATTCAAGTGCTGCTGAGGAAGACCAGCCTGAAAGGAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTTCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGAAGAGTTGTTAGCGAAGAAGTGGAGCGTGCTTTAGCAAAATTAAGCCCTGCCAAGCTTAGTGGGAGATCTTCTCCCAAGCGCATAGAAGGCCCTGATGGCAGCAATTTGCAATTACAATTTAAGACCAGATTATCCCTTCCCCTCTTTACTGGTGGGAAGGTGGAAGGAGAGCAGGGAACTGCCATACATATTGTTTTGATTGATGCTAACACAGGCCATTTTGTCACATCTGGCCCAGCATCATGTGTCAAACTAGACATTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTCGAGAGCCATATTGTGAAAGAGCGAGACGGAAAAAGACCTCTTCTAACTGGTGATCTTCAAGTGGCGCTGAAGGATGGTGTAGGAACACTAGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTGGGGCTCAAAGTTTCCTCAGGATGTTGTGAGGGAATGCGCATTCGAGAAGGCAAAACAGAAGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACATTACCCACCGGCCTTGAGTGATGAGGTATGGAGATTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGGCTAAAAAAAGCAGGTATATGTACTGTTGAAGATGTCCTACGACTTGTGGTCAGAGACCCACAGAGATTGCGCAATATTCTCGGGAGCGGCATGTCGAATAAAATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATGCTGATGATGCAAGGAATATTGGTGTTGTTTTCAATAACATATATGAGTTGAGTGGCTTAATTGCCAATGACCAATATTACTCTGCTGATACTCTATCCGAAAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAAGCATATGAGAACTGGATGCATGTTATTGAGTATGATGGCAATTCTCTGCTAGATTACAATCAGAATAAGAGTTTAGCCACCTCCCAACCTCAGGCTCCTGTGGTTTCCCTTAATTATTCAAATTCAAACTCACTTGATCAGCAGCAGATCTCCATCCAAGGTCTATCAGTTCCTGTACCTACAGAGCAGCCGTCAATGGATCCAGGAGTAACAGTTGGAGGTTATCGTGATGGTGCGAATACCAGATTCTCAATGCAACCACAGAATGCAAATTTTAATTCTTCTATTCAGGTTGAAAATATTGCATTCCCATTACCAAACCAGCTGATGAGTGCTTCACACTCTCAACTTCCAAGAAATGAAAATGAGCTCACCCTGGGTCCACCCCAATCAGCCACTCCTGGCTTTCAGAGTGTCAGTATCTCAAATCCTACCTATAGAGGATTTGAAGATTTCTTTCCGGAAGAAGAGATTCGTATTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAACATCTGCTCCGTATTTTTAATATGGGAGGGCAATCTCATGCTTCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTGCTTATATGCCTGCAACTTCCACGAACTACAACTTAGATGACGAGCGAAACCGTTCCTCAGGTAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAAGCTGCTGAGAGGCGGGCACAACTTGTTGAGCTGGTTGACTCGTAA 1893 0.4369 MQRRSNSMTREKRGLDSSAAEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLSPAKLSGRSSPKRIEGPDGSNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHFVTSGPASCVKLDIIVLEGDFNNEDDDNWSEEEFESHIVKERDGKRPLLTGDLQVALKDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREGKTEAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKRLKKAGICTVEDVLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYADDARNIGVVFNNIYELSGLIANDQYYSADTLSESQKVYVDTLVKKAYENWMHVIEYDGNSLLDYNQNKSLATSQPQAPVVSLNYSNSNSLDQQQISIQGLSVPVPTEQPSMDPGVTVGGYRDGANTRFSMQPQNANFNSSIQVENIAFPLPNQLMSASHSQLPRNENELTLGPPQSATPGFQSVSISNPTYRGFEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHASFNAPEDGYPYSSAYMPATSTNYNLDDERNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELVDS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3133 630 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Lja6g3133 630 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Lja6g3133 630 MobiDBLite consensus disorder prediction 1 28 - -
Lja6g3133 630 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Lja6g3133 630 PANTHER CALMODULIN-BINDING PROTEIN 6 628 - -
Lja6g3133 630 PANTHER OS02G0177800 PROTEIN 6 628 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3133 Lja-Chr6 59970879 59976634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3133 1 625 Calmodulin-binding Proteins AT5G57580 62.442 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3133 - - gmx:100802994 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3894 4 71609714 71614899 Lja6g3133 6 59970879 59976634 PCT