Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3065 ATGGCAGCTGCGATTGTGGGTGGAGCTTTTCTCTCTGGTTTTGTTAATGTTGTTCTTGATAGGCTCACTTCTCCTGAGTTTCTCAACTTCATCCGGAGAAAGAAGCTTGACAATTTGCATCAAAGGTTGAAGACTACTCTTTATGCCGTTAAAGCTGTGCTGAACGATGCAGAGCAGAAACATATAACAGACTCTGAAGTGAAAAACTGGCTTGATGACCTCAAAGACGCTGTCTATGTGGCTGATGACGTTCTGGATCTGCTTTCTACTAAAGCTGCCACTGGAAAGCAGGTGAGCAACATCTTCTCTAGACATTTCAATTTCAATTCTCAAGACAGGGACATGGTTAACCGCTTGGAAGACATAGTTGGCAGACTAGAATCCATTGTCAAACACAGAGATATTCTTGGTCTTAAGGAGGTTGCTAACGTCACCATGTCATCGAGACTTCCATCTACCTCTCTCATGGAGACTCGGTCTACTATCTATGGTAGGGATCAAGATGAGAAGGCCATACTCAAGTTGTTGTTAGATGATAATCAAAGTGATGGTAAAGTATCTGTCATCCCTATTGTGGGCATGGGCGGAGTGGGGAAAACCACTTTAGCCCAACTGGTGTATAATGATGATCATGTAAAGCAGAAGTTTAGTTTACGTGCATGGGCTTGTGTTTCAGATGAATTTGATATTCTCAAGGTTAGGAAGACTATCACAGGGGCTATTACCAAAAGAAATTGTACTCTGAATGATATCGATTTGCTTCATCTTGAATTGAAGGAAAATTTGACCGGGAAGAAATTCTTAATAGTATTGGATGATGTTTGGATGGAGAATTCTGTTAATTGGAATTTTCTTATAAAACATCTTCAGTTCGGGACACAGGGAAGTAAAATCCTCGTGACAACACGTAGTGAAAAAGCTGCTTCTATGATCCAAACCTTCCAATGTTACCATATGAATCAATTGTCTGATAAAGATTGTTGGTATGTTTTTGCGAGCCATGCAGGTATTTCATTAGAATCTACCGGAAACATGACTTTTGAAACAATTGGTAGACAAATTGTTAAAAGGTGTAAGGGGTCACCTTTAGCGGCACAATCACTTGGAGGCTTATTGCGAGGGAAGCATGATATCAGAGACTGGAACAATATATTGAATAGCAACATTTGGGAACTTCCTGAAAATGAGAGCAATATTATTCTAGCATTGAGAATTAGTTATCATTATCTACCTCCACATCTGAAACGTTGTTTTGTTTATTGTTCATTGTTTCCGAAGGATTATAAGTTTGATAAAGATGAACTAATCTTGTTGTGGATGGCGGAGGATCTTTTAGAGCCTACAAAAACTGGAAAGACTTTAGAAGAAGTTGGTCATGGGTATTTTGTTGATTTGGCTTCAAGATCATTTTTCCAGAGAGATATATCGAATGAGTATTTTGTGATGCATGATCTTATACATGATTTAGCAATCTTACTTAGTGGAGAATTCTATTCTAGATTGGAAGAACTTGGAAAAGAAGCTAAGATCAGTACGAAGACTCGTCATTTGTCAATTAGTGGGTTCATTGGTCAAGTCTCAGAAAGTTTTGATATTTTTTCCAAGGTAAAATTTTTGAGGTCATTTTTGCCAATTAATCTCAAAGATTCTCCATTCAACAATGGAAAGGCAGCATGCACCATTCTCTCCAATTTGAAATACCTAAGAGAATTGTCATTCTGCAAATTCTCAAATCTAGATGCATTACCCGATTCAATAGGTGAAATGATTCATTTGCGATATTTAAATCTCTCTCACACAAGTATAAATGCTCTACCAGAGTCATTGTGTAACTTATACAATTTACAAACATTGAAGTTGTACAATTGTAGGGAGCTGACTATGCTGCCTAATGACATGCAAAATCTTGTGAAGTTGCGCCATCTTGATATCTGGGGAACTGATTTAAAAGAGATGCCTAGAGAAATGAGTAAATTGCATCATTTGCAGCATTTAAGTTGCTTTATTGTGGGCAAGCATGAAGAGAATGGGATCAAGCAACTCGGAAAACTTTCAAATCTTCATGGATTACTTACAATTATGAAATTGGAGAATGTTAGCAACAGTAATGAAGCATTGGAGGCTAAGGTAAGGGATAAGAAGCACCTTGACCGCTTAGAATTGTGCTGGTCTTCAGGAAACGATTTTAACGATTCCCAAGGTGAAATGGACATTCTTTGCAAGTTACAACCTCATCAAGACCTGAAAGGACTAGAGATATCTGGATACAGGGGCACAAAATTTTCAGAATGGGTTGGATACTCTTCCTTCCATCGCATGACTCGCATAGTTCTATCTGGCTGTGAGAACTGTTGTATGCTTCCTTCCCTTGGACAACTACCCTCTCTCAAGAGTCTTCATATTAGAAAATTGAATGGGCTTGAGAATGTGGGTGTTGAATTTTTCAAGAGTGATGATTCCTTTACTGGGACACCCTTTCCCTCCCTTGAAAAATTGGATATTTGGAACATGGCATGTTGGGAAGTGTGGCATCATCCAATTGAGTCAAATGCCTTTCCTCAACTAAAGCGCCTCACCATAAGTGATTGTCCCAGATTAAGGGGAGATTTGCCAACTCATCTTCCAGCTTTGGAATCACTTTCGATTGAGAATTTTGAGCAGCTTGCTTCTAACCTTCCTAGAGCTCCCGTCATCCGGTCATTAAAGGTAGAGAAAAGCAATAAAGTGTCCTTACGAGAGCTACCACTTTCGGTGGAAGAGCTAGAAATCATAGGAAGCGAGGCGGTGGAGTCTATGTTTGAGGCCATCACCATCACCATCACCATCACCCAACCAACTTGTCTTCAAGTTTTAAAGATCTGGAGTTGCTCATCTGCCTTATCATTCCCGGGAGATTGTTTACCCGCATCACTCAAGAGCTTGGAAATCTGGGATTTCAAGGAACTAGAATTTCCAAAGCAAAACCAGCAGCAGCACGAGTTACTTGAAGCACTGACTATATGGGACAGCTGTGATTCTCTCATATCCCTTCAGTTGGAGACCTTTCCAAATCTCCGTTCTCTCACCATCATAAACTGTGCAAATCTGGAACGTATTTCAGTACCGAATGCAGGTCTTCACAATCTCACATCTTTCGAGATAAATGACTGCCCCAAATTTGTATCATTCCCAATAGAAGGATTGCATGCGCCCAACTTGACTGAAATCGACGTCTCTTATTGCGACGAGTTAAAGTCATTACCTTGTCACATGAATACTCTTCTCCCAAAGTTAGAATCTCTGTGTATAGGTGATTGTCCAGAAATTGAGTCCTTTCCTAGTAAAGGGGATATGCCGTCTAGCTTGAGATCACTTACCATCTACGGCTGCGAGAAATTAATGAGGAGCACATGCCTAGCTTCGATGGACATGCTCACTGACCTTACCATTGGAGGTCCATGGGATGGTGTCAAGTCCTTCCCGCAGGAGGGTTTGATGTTGCTGCCTCCCTCCCTTACCTTCCTGTGCCTACATGAATTAACAAGTGTGGAGACGTTGGAGTGCAAGGGGCTTCTCCACCTCACGTCCCTCCAACAATTATCAATTTGGGACTGTCCCAGGCTGAAGAATATGGCGGGAGAAAGGCTGTCTGCCTCTCTAATAAAACTTGATATCATTAGGTGTCCTCTGCTGGAAGAACGGTGCAAAATGAAGCACCCACAAATATCTTGA 3711 0.4069 MAAAIVGGAFLSGFVNVVLDRLTSPEFLNFIRRKKLDNLHQRLKTTLYAVKAVLNDAEQKHITDSEVKNWLDDLKDAVYVADDVLDLLSTKAATGKQVSNIFSRHFNFNSQDRDMVNRLEDIVGRLESIVKHRDILGLKEVANVTMSSRLPSTSLMETRSTIYGRDQDEKAILKLLLDDNQSDGKVSVIPIVGMGGVGKTTLAQLVYNDDHVKQKFSLRAWACVSDEFDILKVRKTITGAITKRNCTLNDIDLLHLELKENLTGKKFLIVLDDVWMENSVNWNFLIKHLQFGTQGSKILVTTRSEKAASMIQTFQCYHMNQLSDKDCWYVFASHAGISLESTGNMTFETIGRQIVKRCKGSPLAAQSLGGLLRGKHDIRDWNNILNSNIWELPENESNIILALRISYHYLPPHLKRCFVYCSLFPKDYKFDKDELILLWMAEDLLEPTKTGKTLEEVGHGYFVDLASRSFFQRDISNEYFVMHDLIHDLAILLSGEFYSRLEELGKEAKISTKTRHLSISGFIGQVSESFDIFSKVKFLRSFLPINLKDSPFNNGKAACTILSNLKYLRELSFCKFSNLDALPDSIGEMIHLRYLNLSHTSINALPESLCNLYNLQTLKLYNCRELTMLPNDMQNLVKLRHLDIWGTDLKEMPREMSKLHHLQHLSCFIVGKHEENGIKQLGKLSNLHGLLTIMKLENVSNSNEALEAKVRDKKHLDRLELCWSSGNDFNDSQGEMDILCKLQPHQDLKGLEISGYRGTKFSEWVGYSSFHRMTRIVLSGCENCCMLPSLGQLPSLKSLHIRKLNGLENVGVEFFKSDDSFTGTPFPSLEKLDIWNMACWEVWHHPIESNAFPQLKRLTISDCPRLRGDLPTHLPALESLSIENFEQLASNLPRAPVIRSLKVEKSNKVSLRELPLSVEELEIIGSEAVESMFEAITITITITQPTCLQVLKIWSCSSALSFPGDCLPASLKSLEIWDFKELEFPKQNQQQHELLEALTIWDSCDSLISLQLETFPNLRSLTIINCANLERISVPNAGLHNLTSFEINDCPKFVSFPIEGLHAPNLTEIDVSYCDELKSLPCHMNTLLPKLESLCIGDCPEIESFPSKGDMPSSLRSLTIYGCEKLMRSTCLASMDMLTDLTIGGPWDGVKSFPQEGLMLLPPSLTFLCLHELTSVETLECKGLLHLTSLQQLSIWDCPRLKNMAGERLSASLIKLDIIRCPLLEERCKMKHPQIS* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3065 1236 SUPERFAMILY L domain-like 944 1227 - -
Lja6g3065 1236 Gene3D - 142 316 IPR027417 -
Lja6g3065 1236 Coils Coil 696 716 - -
Lja6g3065 1236 CDD RX-CC_like 13 129 IPR038005 -
Lja6g3065 1236 SUPERFAMILY L domain-like 481 898 - -
Lja6g3065 1236 Gene3D - 321 406 IPR042197 -
Lja6g3065 1236 PRINTS Disease resistance protein signature 261 275 - -
Lja6g3065 1236 PRINTS Disease resistance protein signature 188 203 - -
Lja6g3065 1236 PRINTS Disease resistance protein signature 358 372 - -
Lja6g3065 1236 PRINTS Disease resistance protein signature 610 626 - -
Lja6g3065 1236 Gene3D - 15 127 - -
Lja6g3065 1236 Gene3D Ribonuclease Inhibitor 933 1233 IPR032675 -
Lja6g3065 1236 Gene3D Ribonuclease Inhibitor 524 932 IPR032675 -
Lja6g3065 1236 Gene3D - 407 491 IPR036388 -
Lja6g3065 1236 Pfam NB-ARC domain 171 387 IPR002182 GO:0043531
Lja6g3065 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 421 IPR027417 -
Lja6g3065 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 30 871 IPR044974 GO:0006952
Lja6g3065 1236 Pfam Rx N-terminal domain 11 97 IPR041118 -
Lja6g3065 1236 PANTHER OS05G0414200 PROTEIN 30 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3065 Lja-Chr6 59425921 59429631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3065 169 375 WRKY Transcription Factor Family AT5G45050 26.484 4.14e-09 59.3