Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3064 ATGAAATGGTGCAATGACTCTGATAAGGAGAAGGGCAATAAATATTTAATCACGCCCACGAATACTCCTAAAGCTATCATCAATCTCACAGAAGGAATTCATACAATAAAATGCCCCTCATGTAGCCATAACACGGATGTCAGAGATCAGGGTGGAATTCATGGATTGCCGGCTGGAGTGAAGTTTGATCCAAATGACCAAGAAATACTGGAGCATTTGGAGGCCAAGGTAGTGTCTGATGTGTGCAAGCTTCATCCCCTTATTGATCAGTTCATACCAACGCTTCAAGGCGATAATGGAATCTGCTATACACACCCAGAAAAGCTACCAGGAGTTAGCAAAGATGGGCAGGTCCGCCACTTCTTTCACAGGCCTTCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGATGAAGGAAGCGAAACTAGATGGCACAAAACAGGGAAAACTAGAGCTGTTTTTGCTGGTGGTGGTGCAGTGAAGGGTTTTAAAAAGATTATGGTACTCTACACCAACTTTGGCAGGCAAAGGAAGCCTGAGAAGACCAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGCAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTACCAGACACAACCTAGACAATGTGGTACTTCCATTATAAGAGATCCTCCATAG 696 0.4296 MKWCNDSDKEKGNKYLITPTNTPKAIINLTEGIHTIKCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSIIRDPP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3064 231 MobiDBLite consensus disorder prediction 129 148 - -
Lja6g3064 231 SUPERFAMILY NAC domain 52 216 IPR036093 GO:0003677|GO:0006355
Lja6g3064 231 Gene3D NAC domain 65 220 IPR036093 GO:0003677|GO:0006355
Lja6g3064 231 Pfam No apical meristem (NAM) protein 57 197 IPR003441 GO:0003677|GO:0006355
Lja6g3064 231 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 225 - -
Lja6g3064 231 ProSiteProfiles NAC domain profile. 56 216 IPR003441 GO:0003677|GO:0006355
Lja6g3064 231 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 225 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3064 Lja-Chr6 59421536 59423963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3064 1 226 NAC Transcription Factor Family AT4G28500 69.264 1.87e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lja6g3064 NAM 7.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3064 - - lja:Lj6g3v2006500.1 480.33