Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3050 ATGGAAGAAGAGAATAATTCATGGATAAGGAGGACTAAATATTCTCACACAGTTTGCCATCGTTTGGATTCATCTAGTTGGGGCGCTCTTCCATTCCGCATGGAGTCGAAGCACGATTCAAGGGCTTCTTCTGCTATTAAGGTTCAGACAAACCCCATAACAAACAAGCAGAGAGCTCTGTCACCAATATTGCCTCAAACTTCTCTTTCTGATGCTTTTAGGGAAGCTAGGCATGAACAGAAGAGGTTCTCAACACCAGGTCCTAGCAGGGAGAAGAGGATTATGGGCTCGTTATCCGACAAGATGGATTCTCTGGAAATTAAGGGATCAAGTTCTTCAAAATCATCCTCCAGAAGAAGCCCAAGTAGGTCAATGAAACCGAAGCCCCGCAAGGACTTGTCATGGAGCAAGTATTTTGATAATGGTAGTGGAGGAAGGGTTACCGCTGTGGAAACAGCTGAGGAATGGAGTATTGACATGTCTAAGCTGTTCATAGGCCATAAGTTTGCTCATGGGGCTCATAGCAAGCTATACCTTGGTACATACAAGGGGTATCCTGTTGCTATTAAATCCATTTTGGTACCTGATGATGACGAAAATAGAGACTTGGCTCTTCGATTAGAGAAGCAGTTCATTAGAGAAGTCACCCTTTCATCTCGCCTCCACCATCCAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAAGCTTATTTTATTATTACAGAATATCTGGCAGAGGGTTCGTTGAGGGCATATTTGCATAAGTTGGAGCACAAAACTATTTCCCCACAAAAGCTAATAGCTTTTGCTCTAGATATTGCTCATGGAATGGAGTATATACACTCTCAAGGTGTAATTCACCGAGACCTTAAACCGGAGAATGTCCTTATCAGTGAAGAGGGTCACCTCAAGATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATCCTGTGACTTGTTAGCTGATGACCCTGGCACCTACCGTTGGATGGCACCTGAGATGATTAAACGTAAGTCTTATGGGAGAAAGGTTGACGTCTATAGTTTTGGGCTTATGTTATGGGAAATGTTGACTGGAACAGTACCATACGAGGATATGAATCCTTTCCAGGCTGCTTTTGCCGTAGTAAATAAGAATTCAAGGCCAGTTATTCCTTCAAACTGCCCTCCTGCTATGCGTGCTTTGATTGAGCAATGCTGGTCCTTGCAACCAGATAAGAGGCCTGAGTTCTGGCAGGTTGTGAAAGTGTTAGAGCAATTTGAATCTTCTCTTGCCCGTGATGGAACCCTAACTCTGCTGCAAAATCCATGTTGCCAAGATCATAAGAAAGGGCTTCTTCACTGGATTCAAAAGCTTGGTCCCGCTCATCATAATAGTGGCCCTATGCTTAAACCCAAATTCACATGA 1407 0.4357 MEEENNSWIRRTKYSHTVCHRLDSSSWGALPFRMESKHDSRASSAIKVQTNPITNKQRALSPILPQTSLSDAFREARHEQKRFSTPGPSREKRIMGSLSDKMDSLEIKGSSSSKSSSRRSPSRSMKPKPRKDLSWSKYFDNGSGGRVTAVETAEEWSIDMSKLFIGHKFAHGAHSKLYLGTYKGYPVAIKSILVPDDDENRDLALRLEKQFIREVTLSSRLHHPNVIKFVAACRKAYFIITEYLAEGSLRAYLHKLEHKTISPQKLIAFALDIAHGMEYIHSQGVIHRDLKPENVLISEEGHLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLMLWEMLTGTVPYEDMNPFQAAFAVVNKNSRPVIPSNCPPAMRALIEQCWSLQPDKRPEFWQVVKVLEQFESSLARDGTLTLLQNPCCQDHKKGLLHWIQKLGPAHHNSGPMLKPKFT* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3050 468 ProSiteProfiles Protein kinase domain profile. 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3050 468 CDD STKc_MAP3K-like 170 417 - -
Lja6g3050 468 Pfam Protein tyrosine and serine/threonine kinase 165 417 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 SUPERFAMILY Protein kinase-like (PK-like) 146 417 IPR011009 -
Lja6g3050 468 MobiDBLite consensus disorder prediction 104 122 - -
Lja6g3050 468 SMART serkin_6 163 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3050 468 Gene3D Phosphorylase Kinase; domain 1 151 244 - -
Lja6g3050 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Lja6g3050 468 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672|GO:0006468
Lja6g3050 468 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 444 - -
Lja6g3050 468 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 444 - -
Lja6g3050 468 MobiDBLite consensus disorder prediction 39 137 - -
Lja6g3050 468 MobiDBLite consensus disorder prediction 72 99 - -
Lja6g3050 468 MobiDBLite consensus disorder prediction 43 68 - -
Lja6g3050 468 Gene3D Transferase(Phosphotransferase) domain 1 245 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3050 Lja-Chr6 59295998 59298609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3050 1 456 MAP Kinase Kinase Kinase AT5G58950 55.773 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lja6g3050 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3050 - - gmx:100500590 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3824 4 70837322 70841476 Lja6g3050 6 59295998 59298609 PCT