Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3048 ATGGGAGAAGCATTCGAAGTCGGCGCAGTTCCTTTCAACGCCGACGGTTGGGGGCCATTGGACAACGCAGCCGCCAACACCAACCTCCCTCTCAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGACAAGCTCGGCCGGATCGCCGATTGGACCCGCAACTTCAACAACCCGACCCGCTCCAAGAACCCAGCCGACTCGGCATTCGACTTCTCCCTCGACGAATCCTTCCCCGCTTCCGCCGATGACGACGCCTCCTTCCGCCTCGTCGACGGCAAACCCCCTCCGCGTCCCAGGTTCGGTCCCAAGTGGCGCTTCCAGCAGCAGCGTCAACTCCCTCAGCGTCGCGATGAGGAGGTTGAAGCCAAGAAGCGTGAGGCCGAGAAGGAACGTGCCCGCCGCGATCGCCTGTACCACCTGAACCGTTCAAACCCTAACGCCCCTCGCCGTGAAGCTGCGGTGTTCAAATCGTCGGTGGATATTCAGCCAGAGTGGAACATGCATGATCAGATCCCATTCTCCACGTTCTCCAAGCTCTCCTTCACCGTCCCTGAACCCGAAGATCTTCTCCTCTGTGGTGCTCTCGAGTACTACGATCGCGCATACGATCGAATCACCCCGAAGAACGAGCGCCGGCTTGAGAGGTTCAAGAATCGCAACTTCTTCAAGGTTACCACCACTGATGACCCTGTTATTCGGAGGCTCGCGAATGAGGATAAAGCGACTGTTTTTGCCACTGACACCATTCTCTCCACGCTCATGTGTGCACCCAGGTCTGTTTACTCTTGGGATATCGTTGTTGAGCGTGTTGGGAATAAGCTTTTCTTTGATAAGAGAGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAGACATCGCAGGAGCCTTTGCCTGAGGCTAAGGATGATATTAACTCTGCTCACTCGTTGAGCGTTGAGGCGGCTTATATCAATCAGAATTTCTCTCAGCAAGTGTTGATTAGGGATGGGAATAAGGTTACTTTTGATGAGGCTAATCCTTTTGCTAATGAGGGTGAGGAGGTTGCTTCTGTGGCTTATAGGTATAGGCGGTGGAAGCTTGATGATGATATGTATCTGGTTGCTAGGTGTGAGGTGCAGAGTGTTGTTGATGTGAACAAGCAGAGGTCGTTCCTTACATTGAATGCGTTGAATGAGTTTGATCCTAAGTATTCCGGTGTTGATTGGAGGCAGAAGTTGGAGACGCAGAGAGGTGCTGTGTTGGCTACTGAGCTCAAGAACAATGCAAATAAGTTGGCTAAATGGACTGCCCAAGCTCTGCTTGGAAGTGCGGATATGATGAAGTTGGGATATGTGTCTCGTATCCATCCCCGTGACCACTTTAATCATGTGATTTTGGCTGTGGTTGGATATAAACCCAAGGACTTTGCTGCACAGATTAATTTGAACACTTCTAATATGTGGGGAATTGTGAAGTCTATTGTGGATTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTTGTGAAGGATCCATCTAAGCCCCAGGTTAGGATTTATGAGGTTCCAGCAAATGCATTTGAAAACGACTACGTGGAGGAGCCACTTCCTGAAGATGAACAAGTTCAACCTCCAGCAGAGGGTGCTGATGGTGAAGAGGCTGCTGCTACCACCAATGATGTGGAAGATAAGCCAGTAGAAGATCAAGCTTGA 1689 0.5098 MGEAFEVGAVPFNADGWGPLDNAAANTNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSAFDFSLDESFPASADDDASFRLVDGKPPPRPRFGPKWRFQQQRQLPQRRDEEVEAKKREAEKERARRDRLYHLNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVERVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLGSADMMKLGYVSRIHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPANAFENDYVEEPLPEDEQVQPPAEGADGEEAAATTNDVEDKPVEDQA* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3048 562 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 513 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lja6g3048 562 MobiDBLite consensus disorder prediction 109 132 - -
Lja6g3048 562 Coils Coil 114 134 - -
Lja6g3048 562 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 525 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lja6g3048 562 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 561 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lja6g3048 562 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 3 561 - -
Lja6g3048 562 MobiDBLite consensus disorder prediction 83 132 - -
Lja6g3048 562 MobiDBLite consensus disorder prediction 522 562 - -
Lja6g3048 562 PIRSF Transl_init_eIF3d 1 543 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3048 1 560 Eukaryotic Initiation Factors Gene Family AT4G20980 78.194 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3048 K03251 - gmx:100799613 1030.01