Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3019 ATGAAGGACGAGGCTGCTTCAGATGGAGATGATAACAACGATACCCAGAAGAGGGATGATGATGGGGGTGGTGGTGATAATAGCAAACTTGGGAATTCCAGTGAGGGTCAGAGCAAGCCAAAGCGTCAGATGAAGACCCCTTTTCAGCTTGAAAATCTCGAGAAAGCTTATGCTTCGGAGATGTACCCATCAGAGGCTGTGAGGGTAGAGCTGTCGGAAAAATTGGGGCTGACGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAAGACAAGAAGGACTTGCCGCCCAAGAAGCCGCTGAAGGCACCACCTTTGCTAGCTTCTCCCACGGATGACCTGAGATTGGGCTCAGAACCTGGAAATGATTATGGATCCGGGTCGGGTTCTGGATCCAGCCCGCCTTCCCGGTCGGAGTTGAGGAATGCGGTGCCGGTCCGGGCTGTTCCGGGGTACTATGAGTCGCCGCAGACTATTATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTCTGAGGGAAGATGGACCCATTTTAGGAGTGGAGTTTGATCCTTTGCCACCGGATGCATTCGGGGCACCTATAGCTGTTGCAGAACAACAGAAGCGGCCTAATCTTGCTTATGACAGTAAAATATACGATAGACATGATGTTAGAACTAATAAGGCTCCATTCCAGGCAATGGCAAGGACATTCCCTGAATACTCATTTCTTCCAACGCACCAGCCTGGCATTAGATCTGATGCTTTTGGGCAATTGAGCCAACCTCATTTGTATAGTCCAATGGAGGGTCCTACCAGAACTCCTTCTTTTCCCCCCGGAAATGAACATCTACCCAGAATTCATGCTACTCAAAGTCATTCTTCTCGTGTGAAAGAGGAACATGATGCATATACCCAAAGTCAGTCTTCTCGTGTTCGCCTTTCGTCTCCACAGGAGAAGCAAGGGTTTTCCTATCCATCTCCTCCTCGTGACAGCAATGTTGCCCCTAAAAGGGAACCTCCCACGAACATGGCTGACACTGGAATGAACTCCAACTTTAGTGATCACCCAATTGTTGGACAAGAAAATCCTGGTGGAGAAGTTTCCCATAATGATTCAATATTGCGGATGGAGAAGAAACGAAAGGCTGATGATACCAAAGGTTCAAGGGACGTTGAAGCGTCTGAAATGAAGACGCGGAAGGAGCTTGAGAAACAAGATAACCTTAGACGCAAGAACGAAGAGCGGTTGAGGAAAGAAATGGAAAAACAAGACCGTGAAAGAAGGAAGGAAGAAGAGAGACAGATGCGTGAGAGACAGCGAGAAGAGGAAAGATCTAAGCGTGAACAGAGACGCGAGGTGGAGCGAAAGGAAAAGTTTTTGCAGAAAGAAAGTTTGAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAAGCAAATGCTCGTAGAATAGCTAAAGAGTCCATGGAGCTTATTGAGGATGAGCAGCTGGAATTGATGGAGTTGGCTGCCGCAAGCAAGGGATTTTCCTCTATTATCCACATTGATCTTAATACTTTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCTACGAGTGTAAAGCTAAAAAAACCATTTGCTGTCCAACCTTGGTCCAACTCAGAACAAAATGTTGGTAACCTTCTCATGGCTTGGAGATTCTTGATTACATTTGCTGATGTTCTTGAGTTATGGCCTTTTACTCTTGATGAGTTTGTACAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGGTGCATGTTGCTCTTCTTAAAGTGATAATAAAAGATATTGAAGATGTTGCAAGGACGCCTTCTACTGGATTAGGAACGAATCAGAATGGAGCTGCTAATCCTGGTGGTGGCCATCCAGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGACATAAGAAATTGGCAGAAGAACTTGAATCAATTGACATGGCCAGAGATTTTCCGACAGTTAGCACTATCTGCAGGATTTGGACCGCAGCTGAAGAAAAGAAGTATTACGTGGTCATATGCAAATGATAAAGATGAGGGAAGAAATAGTGAAGACATCATTTCTAAACTTCGTAATGGTTCAGCAGCTGAAAGTGCAGTAGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCGAGGCACCGCTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCACGTTCTCTCACTGGAGGGTAGCAAGGGTTTGACAGTACTAGAGCTCGCAGAAAAAATTCAGAAATCTGGTCTCCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACCAGAGATACTAAGCTTTTTGAAAGAATAGCTCCATCAACGTATCGTGTACGATCCGCATATAGAAAGGATCCTGCTGATTCTGAATCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGTTTTCTAGCTGGTGAAGATGCCGAGGACGTTGAAAGAGAAGAGGAGTCAGAAAGTGATGAAGCTGATGAGGATCTTGAAGACGGTGATTTAGTAATTCCCTCTAGTGCAAACCAAAAATCAGAACAGTATGATGACACAAACATTTGCCCATCAAATGGAAAAGAAAATTTGGGACATGATGTAGATCTTATTCAAAATGAATTTGATACAGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGGTGCTGATTGTCCTAGTTCTGTCACTGGACAACCTATTGCTAGCGAAGGTTTAAATACAGGGAATCTTGATGAGGATAATATGGAAATTGATGAAAGCAAATCGGGAGAATCCTGGGTTCAAGGGCTTACCGATGGAGAATATTCTGATCTCGGTGTAGAAGAGCGTCTCAATGCTCTTGTTGCATTGGTTGGTCTGGCCAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGATGCACAGACAGATAAAGTTCGTTTGAAAGATGATAATATTAGTAAATCAGATTTGGCATCACATATTGGGAATAAAGTTGAAGCGCAATATACATATCCTGCGGTGGAGAGCAACCAAAGCCCATTGCTTGACATTAATATTAACAATATTAACAATGAAGCGTCTCCTGGCACTGCAGACAAGCAGAAAGGAGCTTCCATTGCACAGAGCCTACCTAGTGAAAAGTCCTCATTAGTTCAAGATTTCTGCCCAGGCACAGGTCCAGACAACCCTCAGATTCAGGTACCTGTGCAATGTTCAAAAAGGTCGCGTTCGCAGTTGAAATCCTATATTGCCCACAAAGCAGAGGAGACGTGTGTCTACAGGTCTCTACCCCTTGGCCAAGATCGCAGACGTAATAGATACTGGCAGTTTGCTGCATCTGCTTCTAGCAACGATCCTGGTTCTGGCAGGATCTTCGTTGAACAGCATGATGGCAATTGGAGGCTTATTGACTCTGGAGAGGCCTTTGACAATCTTTTGACATCTTTAGATTCACGTGGGATTAGGGAATCACACTTGCACTTGATGTTGCAAAAGATTGAGAAGTCCTTTAAAGAAAATGTACTAAAAAATACACCCATAATTGGAGGCAGCGATGAAGTTTCGATTGAAAAGGAAGCTAAAGAAACACATCTCATCCCTGATCGCCATGACAGTTCTAGCAGTGCACTTCATGGCCTGAACCCTGATATATCTGAAACTTCTTTATCCTTCAAAATTGAGCTAGCCAAAAGTGAGAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAAAAGTGGATGTGGAAAGAGTGCTATAATTCATCAATTTTATGTGCAACGAAATATGGTATAAAGAGATGCAAAGCTCTGGTGGACATTTGTGATATCTGCCTCGATCCTTATTTTGTTGAAGATTCCCATTGCAATTCCTGCCACAGGACTTTTTCCTCAAATATTGGATTTAATTTTTCAAAACATGCATTTCAATGTGGAGACGAGTTATCCAAAGATATTTGTATTTTGGAAAATTCGCTCCCACTGCGTACAAGATTGCTTAAGGTCTTGTTGGCTTGTATGGAGGCATCTGTTCTCTCTGAAGGATTTGGAACAAATTGGACTAACGATATTAGGAAGCAATGGGGTGTGAAGTTGAGTAAATCGTCTTCTGTTGAGGAACTTTGGCAGATATTGGTCATATTTGAAAGAGCACTACGGCGTGATTTTCTGTCTTCAAACTTCTCAACAACAGATGAATTGTTGGGATCGACAAGCATATCACAAAGTTCTGCACATGCCACTACTGATCCTGAATCAGTCGCTGTACTTCCATGGGTTCCACAAACCACTGCAGCTTTGTCTCTCAGACTCTTTGAGTTTGATTCATCCATCAGCTACGTGAAGCTTGAGAAAGTTGAGCCTTGTGAGGAAAAAGATGGGAACGTATGCACAAAGCTTCCATCAAGATATACTCCCTTCAAATCTAATAGGGAGATTGAACCAGCAGAATTTGACAGTGTTGAACTTCCTAGAGATAAATCTGCTCCTAATAAAATTGCACGAGGTGGGTATAAACGTGGACGAGGGACTAGTGATCAAGGACGGGGTAAAAAGCTGGCTAAAAGAATGTACAATTCCAAACGAGGTACTGGCCGCCGAAATGCTGTGGTCACTGACAATCTAAGTCAGAAATTAAAACATCTGGGACGAACACAAGGACAAAGTGGTGGACGAGGTCGCCGAACAGTCAGGAAACGAAGAGTAGAGAAGAGAGCTGTTGAAGATTTGTTAGTAGGCCACACAGCCGCCAGTCATAGCTTCAAGAGTGGTGGAGAACCATTGAGAAGCTTGGATGAAGAATGGAATGGAGAAAAGGCAAGTCCCATGACTCCTGTGCACATTGGGGTTCCTGAGATTAGTAACAGTGCTGAGGAAGTGGAATCTGATGAAAATGCTCAAGCAGTGGAATATGATCAAGGGAACTGGGAGATAAGTTATAATGGTGTCCCCTCTAACAGATGGATTAGGGAGGATTTGGTTGGAATGAGTGATGAGGATGTGGATGCTTTTGAAGATGACAATGTCATTGAAGAGAATGAGGAGGAGGATTTGGAAGGAGATGTTATGAGTGATGATGGTTCAGATGGCATGGCAAATAGAGTAGCAAATGGAGGAGTTTCAGATTCTGAAGATTCTTCTGATTAG 5286 0.4362 MKDEAASDGDDNNDTQKRDDDGGGGDNSKLGNSSEGQSKPKRQMKTPFQLENLEKAYASEMYPSEAVRVELSEKLGLTDRQLQMWFCHRRLKDKKDLPPKKPLKAPPLLASPTDDLRLGSEPGNDYGSGSGSGSSPPSRSELRNAVPVRAVPGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVAEQQKRPNLAYDSKIYDRHDVRTNKAPFQAMARTFPEYSFLPTHQPGIRSDAFGQLSQPHLYSPMEGPTRTPSFPPGNEHLPRIHATQSHSSRVKEEHDAYTQSQSSRVRLSSPQEKQGFSYPSPPRDSNVAPKREPPTNMADTGMNSNFSDHPIVGQENPGGEVSHNDSILRMEKKRKADDTKGSRDVEASEMKTRKELEKQDNLRRKNEERLRKEMEKQDRERRKEEERQMRERQREEERSKREQRREVERKEKFLQKESLRAEKRRQKEELRKEKEAERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGFSSIIHIDLNTLQNLESFRDSLCVFPPTSVKLKKPFAVQPWSNSEQNVGNLLMAWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEVHVALLKVIIKDIEDVARTPSTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPQLKKRSITWSYANDKDEGRNSEDIISKLRNGSAAESAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRSAYRKDPADSESILSEARKKIQIFENGFLAGEDAEDVEREEESESDEADEDLEDGDLVIPSSANQKSEQYDDTNICPSNGKENLGHDVDLIQNEFDTDLPCFPENGSKGADCPSSVTGQPIASEGLNTGNLDEDNMEIDESKSGESWVQGLTDGEYSDLGVEERLNALVALVGLANEGNSIRVVLEDRLEAANALKKQMWADAQTDKVRLKDDNISKSDLASHIGNKVEAQYTYPAVESNQSPLLDININNINNEASPGTADKQKGASIAQSLPSEKSSLVQDFCPGTGPDNPQIQVPVQCSKRSRSQLKSYIAHKAEETCVYRSLPLGQDRRRNRYWQFAASASSNDPGSGRIFVEQHDGNWRLIDSGEAFDNLLTSLDSRGIRESHLHLMLQKIEKSFKENVLKNTPIIGGSDEVSIEKEAKETHLIPDRHDSSSSALHGLNPDISETSLSFKIELAKSESEKKAALRRYQDFQKWMWKECYNSSILCATKYGIKRCKALVDICDICLDPYFVEDSHCNSCHRTFSSNIGFNFSKHAFQCGDELSKDICILENSLPLRTRLLKVLLACMEASVLSEGFGTNWTNDIRKQWGVKLSKSSSVEELWQILVIFERALRRDFLSSNFSTTDELLGSTSISQSSAHATTDPESVAVLPWVPQTTAALSLRLFEFDSSISYVKLEKVEPCEEKDGNVCTKLPSRYTPFKSNREIEPAEFDSVELPRDKSAPNKIARGGYKRGRGTSDQGRGKKLAKRMYNSKRGTGRRNAVVTDNLSQKLKHLGRTQGQSGGRGRRTVRKRRVEKRAVEDLLVGHTAASHSFKSGGEPLRSLDEEWNGEKASPMTPVHIGVPEISNSAEEVESDENAQAVEYDQGNWEISYNGVPSNRWIREDLVGMSDEDVDAFEDDNVIEENEEEDLEGDVMSDDGSDGMANRVANGGVSDSEDSSD* 1762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3019 1761 MobiDBLite consensus disorder prediction 27 45 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 850 872 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 90 144 - -
Lja6g3019 1761 Pfam DDT domain 569 623 IPR018501 -
Lja6g3019 1761 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Lja6g3019 1761 ProSiteProfiles HARE-type HTH domain profile. 749 818 IPR007759 GO:0006355
Lja6g3019 1761 CDD homeodomain 41 90 IPR001356 GO:0003677
Lja6g3019 1761 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 9 1761 IPR044977 GO:0006357
Lja6g3019 1761 MobiDBLite consensus disorder prediction 254 457 - -
Lja6g3019 1761 SMART testlast3 567 626 IPR018501 -
Lja6g3019 1761 Coils Coil 403 498 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 344 358 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 372 457 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 926 946 - -
Lja6g3019 1761 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1140 1212 IPR028941 -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 1540 1565 - -
Lja6g3019 1761 Gene3D - 24 97 - -
Lja6g3019 1761 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 959 1002 IPR028942 -
Lja6g3019 1761 PANTHER HOMEOBOX DOMAIN PROTEIN 9 1761 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 1 25 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 846 888 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 1724 1761 - -
Lja6g3019 1761 ProSiteProfiles DDT domain profile. 567 626 IPR018501 -
Lja6g3019 1761 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Lja6g3019 1761 SUPERFAMILY Homeodomain-like 28 95 IPR009057 -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 923 964 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 1 50 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 465 484 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 292 306 - -
Lja6g3019 1761 MobiDBLite consensus disorder prediction 307 328 - -
Lja6g3019 1761 SMART HOX_1 38 100 IPR001356 GO:0003677
Lja6g3019 1761 Pfam HB1, ASXL, restriction endonuclease HTH domain 749 817 IPR007759 GO:0006355
Lja6g3019 1761 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3019 Lja-Chr6 58988871 59000805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3019 32 1694 Homeobox Transcription Factor Family AT1G28420 48.118 0.0 1286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lja6g3019 WSD 1.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3019 - - gmx:100777465 2422.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3019 6 58988871 59000805 Lja6g3019 6 58988871 59000805 ECH
Lja4g3788 4 70211255 70221506 Lja6g3019 6 58988871 59000805 PCT