Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3015 ATGCCTCCCCTGTTCCTCCTCCTCCTCCTTCTCCTGGTGGTGCTGCCATCCACCATCTCCACCCTCAACCAAGAAGGTAACTCCCTCTACAACTTCAAGCTCTCAGTAGAAGACCCTGACTCCTCCCTCTCCACCTGGACCAACAACACCACCCCCTGCAACTGGTTCGGCATCACCTGCGACCCCACCAACACCACCGTCACCCACCTTGACCTCTCCAACGCCAACATCCTCGGCCCATTCCCCGCCTCCCTCCTCTGCCGCACCCTCCCCAATCTCACCTCCCTCACACTCTTCAACAACTACATCAACTCCACTCTCTCCCCTCACATCTCCCTCTGCTCCTCCCTCACCCACCTCGACCTCTCCCAAAATCTCCTCTCCGGCGAACTCCCCCACACTCTCCCCCTCCTCCGCAACCTCCGCCACCTCGACCTCACCGCCAACAACTTCTCCGGCCCCATCCCAAACTCCTTCGGAAGCTTCCAGAATCTCGAGGTCCTCTCCCTCGTCTACAACCTCCTCGACTCCACCATCCCTTCTTCCCTCGCCAACATCACCACCCTCAAAACACTCAACCTCTCTTACAACCCGTTTCTCCCCGGTCCAATCCCCTCCGAGCTCGGAAAACTCACCAACCTCGAGATCCTCTGGCTCAGCTCCTGCAACCTCGTCGGAAACATCCCTGACTCCATTGGGAATCTCCACAAGCTCAGGGACTTGGACCTCGCGCTCAACAACCTGCACGGGTCGATTCCGAGTTCGCTGACTCAGTTAACGAGTGTGGTTCAGGTTGAGTTGTATAACAACTCGCTCTCCGGCGAGTTGCCTCAGGGAATGTCGAACCTCAACGCGTTGAGGCTATTCGACGTGTCCATGAACCGTCTTGGAGGGTCCATTCCCGACGAGCTTTGCCGCTTGCCGTTGGAGAGTCTCAACCTCTACGAGAATCGATTCTCCGGCGAGTTGCCGGCGAGCATAGCCTTCTCGCCGAATCTCTACGAGCTCAGGTTGTTTGATAACCAGCTCTCCGGCGAGCTTCCGGGGGATCTTGGGAAGAACGCGCCGTTGAGGTGGGTCGACGTTTCAAGCAACAACTTCTCCGGTCGGATTCCGGCGACTCTGTGCGACCATGGCGCGTTGGAAGAGCTTCTGATGATAGAGAACTCGTTCTCCGGGGAGATTCCGGCGAGCCTGGGCGCGTGCCGGAGCTTGACGCGTGTAAGGTTTGGTTCCAACCGGTTGTCCGGTGAGGTTCCGGAGGGTTTGTGGGGCCTGCCCCATGTGTATTTGCTTGAATTAATCGGTAACTCGCTTTCCGGTTCGATTGCCGGAACCATTGCTGGGGCGAAGAATCTGTCGCAGTTAATGGTTTCCAGAAACAATTTCTCAGGTCCGGTCCCGGCTGAGATTGGAAGATTGGAAAATCTTCAGGAATTTTCAGGTGATGATAACAAGTTCAATGGTTCTTTGCCTGGGAGTATAGTGAATCTTAGGCAGCTGGGGACTCTTGATCTTCATAACAATAACCTCTCTGGGGAGCTTCCTAAAGGGATTCAATTGTTGAAGAAGCTCAATGAGTTGAATTTGGCTAATAATGAGATTGCTGGGAAAATTCCTGATGAAATTGGGAGTATGTCTGTGCTTAATTTCCTTGATCTTTCCAATAATCAATTTTCCGGGAATGTTCCTGTGGGGTTGCAGAATTTGAAGCTCAATCAGCTTAACTTGTCTTACAATCAGCTTTCTGGTGGAATTCCCCCTTTGCTGGCTAAGGATATGTACAAGGCTAGTTTCATGGGTAACCCTGGTTTATGTCGTGATTTGAAAGGTTTGTGCAATGGTAGAGGAGGGGATAAGAGTGCGCGTGTTGTTTGGTTGCTTCGAACTATTTTCATAGTTGCCACTTTGGTGTTTGTCATTGGTGTGGTTTGGTTCTACTTCAAGTACAGAAATTTCAAGAATGCTGGAAGCTCTGTTGATAAATCCAGGTGGACTTTGATGTCATTTCATAAACTGGGTTTTAGTGAAGATGAGATCTTGAACTGCCTCGATGAAGATAATGTCATAGGGAGTGGATCGTCGGGGAAAGTCTACAAGGTTGTACTTACGAGTGGCGAAGCTGTTGCCGTGAAGAAGATATGGGGAGGGCTCAGGAAGGAATTGGAGAGTGGAGAATACATTGAGAAGAGTCTGTTTCAAGACAGTGCTTTTGATGCTGAGGTCGAAACTCTAGGCAAAATTAGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACCACCAGGGACTGCAAGCTACTGGTTTATGAGTACATGCCAAACGGAAGTCTTGGTGATTTGCTGCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTCTTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCACCAATTGTCCATCGAGATGTGAAATCTAATAACATCTTGTTGGATGGAGATTTCGGTGCAAGGGTGGCAGATTTTGGAGTAGCTAAGGTAGTTGAATCCGCTGGGAATCGAACTAAATCCATGTCGGTCATAGCTGGGTCTTGTGGTTATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGCGATACATATAGTTTTGGAGTTGTCCTACTTGAGTTAGTTACCGGAAAGCGGCCAATAGATCCTGAATATGGGGAAAAGGACTTGGTTATGTGGGCATGCAACACCTTGGATCAGAAAGGCGTGGACCATGTTCTTGACTCAAGGCTTGATCCTTGTTTCAAAGAGGAAATTTGCAGGGTCCTAAACATTGGTCTCATCTGCACCAGTCCTCTTCCGATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAGGAAGTGAGTACAGAGAACCAAACGAAACTTGCCAAGAAAGATGGAAAATTATCCCCTTATTACTATGATGATGTGTCAGATCATGGAAGTGTTGCTTAA 2997 0.4982 MPPLFLLLLLLLVVLPSTISTLNQEGNSLYNFKLSVEDPDSSLSTWTNNTTPCNWFGITCDPTNTTVTHLDLSNANILGPFPASLLCRTLPNLTSLTLFNNYINSTLSPHISLCSSLTHLDLSQNLLSGELPHTLPLLRNLRHLDLTANNFSGPIPNSFGSFQNLEVLSLVYNLLDSTIPSSLANITTLKTLNLSYNPFLPGPIPSELGKLTNLEILWLSSCNLVGNIPDSIGNLHKLRDLDLALNNLHGSIPSSLTQLTSVVQVELYNNSLSGELPQGMSNLNALRLFDVSMNRLGGSIPDELCRLPLESLNLYENRFSGELPASIAFSPNLYELRLFDNQLSGELPGDLGKNAPLRWVDVSSNNFSGRIPATLCDHGALEELLMIENSFSGEIPASLGACRSLTRVRFGSNRLSGEVPEGLWGLPHVYLLELIGNSLSGSIAGTIAGAKNLSQLMVSRNNFSGPVPAEIGRLENLQEFSGDDNKFNGSLPGSIVNLRQLGTLDLHNNNLSGELPKGIQLLKKLNELNLANNEIAGKIPDEIGSMSVLNFLDLSNNQFSGNVPVGLQNLKLNQLNLSYNQLSGGIPPLLAKDMYKASFMGNPGLCRDLKGLCNGRGGDKSARVVWLLRTIFIVATLVFVIGVVWFYFKYRNFKNAGSSVDKSRWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLTSGEAVAVKKIWGGLRKELESGEYIEKSLFQDSAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVESAGNRTKSMSVIAGSCGYIAPEYAYTLRVNEKSDTYSFGVVLLELVTGKRPIDPEYGEKDLVMWACNTLDQKGVDHVLDSRLDPCFKEEICRVLNIGLICTSPLPINRPAMRRVVKMLQEVSTENQTKLAKKDGKLSPYYYDDVSDHGSVA* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3015 998 Gene3D Ribonuclease Inhibitor 21 177 IPR032675 -
Lja6g3015 998 SUPERFAMILY L domain-like 46 307 - -
Lja6g3015 998 Gene3D Ribonuclease Inhibitor 330 614 IPR032675 -
Lja6g3015 998 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 980 - -
Lja6g3015 998 Gene3D Phosphorylase Kinase; domain 1 668 772 - -
Lja6g3015 998 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Lja6g3015 998 SUPERFAMILY RNI-like 217 576 - -
Lja6g3015 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Lja6g3015 998 SUPERFAMILY Protein kinase-like (PK-like) 678 965 IPR011009 -
Lja6g3015 998 SMART serkin_6 684 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3015 998 Gene3D Ribonuclease Inhibitor 178 260 IPR032675 -
Lja6g3015 998 PANTHER LRR RECEPTOR-LIKE KINASE 7 980 - -
Lja6g3015 998 Pfam Protein kinase domain 686 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3015 998 Gene3D Ribonuclease Inhibitor 261 329 IPR032675 -
Lja6g3015 998 Gene3D Transferase(Phosphotransferase) domain 1 773 992 - -
Lja6g3015 998 SMART LRR_typ_2 211 234 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 138 161 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 498 521 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 522 546 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 90 114 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 283 307 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 162 185 IPR003591 -
Lja6g3015 998 SMART LRR_typ_2 235 259 IPR003591 -
Lja6g3015 998 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Lja6g3015 998 ProSiteProfiles Protein kinase domain profile. 684 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g3015 998 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3015 Lja-Chr6 58959169 58962879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3015 18 998 Receptor kinase-like Gene Family AT1G28440 68.016 0.0 1350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja6g3015 Pkinase 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3015 - - gmx:100776936 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3015 6 58959169 58962879 Lja6g3015 6 58959169 58962879 ECH
Lja6g3015 6 58959169 58962879 Lja4g3783 4 70126315 70130386 ECH