Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3002 ATGGGAACCTCTGATACACATTTGTTGCTTTCTTCTATTATGCTGACTTTCATTCTTTGCTTGTCATGTTCCATGGCCAAAGTTGAAGCTTTAAACAAAAATGTCTCTGCCTTTTATGTGTTTGGAGACTCCACGGTAGACCCTGGAAACAACAACTATATAGACACGCCTTTCAGGAGCGATTTTCCACCATATGGCATGGATTTTTCTAGCCATGTTCCTACAGGGAGGTTTAGCAATGGGAAGCTTCCCACTGATTACATTGCTTCATATATAGGCCTGAAGGAGCTTCTTCCACCTTATTTGGACCCAAACAGCAATAACCTTGAAGTGCTCATGACAGGAGTTAGTTTTGCCTCTGCTGGTTCTGGTTTTGACCCTCTTACACCAAGCATATCAAATGTAATTCCACTGCCAAAGCAGGTGGAATATTTCAGAGCATGCAAACAGAGGCTGGAAGGTGCTCTGGGTAAGCAAAGAAGTGAAGATCATATGAAGAAGGCTGTGTTTTTCATCAGTGCTGGTACCAATGATTTTGTACTTAATTATTTCACTCTGCCAATGAGGAGAAAGACTTATACTACTCCCTTAGCCTACCAGCAGTTCTTGATCCAGCATGTCAAAGAATTCATACAGGGTTTGTTGGCAGAAGGCGCACAAAAAATTGTAATAGTTGGAGTACCTCCAATTGGATGCCTACCATTCATGATCACCCTGAATTCCCCTAATGCCTTTTTGCAACGTGATTGTCTGGACAATTATTCATCCGTTGCTAGAGATTACAACCTACTTCTCCAACGTGAACTAAACGGAATGCAATCGCAGTTCAGATCATTTAATCCAGATGCTAAGATCTACTATGTTGACATATATGGACCTATAGCAGATATGATTCAAGCTCATGAAAAATTTGGATTTGATGAGGTGAATAGTGGCTGTTGTGGAAGTGGGTACATTGAAGCATCAGTTTTGTGTAACAAGATTTCAAATCTGTGCCCTGACCCATCTAAATACGTGTTTTGGGATTCAATTCACCCAACAGAGAAAGCATACCACAACCTCTTCTTAGCTAATGTGCCCAAAATCGATTTCATCGTTAACAACTAG 1107 0.4092 MGTSDTHLLLSSIMLTFILCLSCSMAKVEALNKNVSAFYVFGDSTVDPGNNNYIDTPFRSDFPPYGMDFSSHVPTGRFSNGKLPTDYIASYIGLKELLPPYLDPNSNNLEVLMTGVSFASAGSGFDPLTPSISNVIPLPKQVEYFRACKQRLEGALGKQRSEDHMKKAVFFISAGTNDFVLNYFTLPMRRKTYTTPLAYQQFLIQHVKEFIQGLLAEGAQKIVIVGVPPIGCLPFMITLNSPNAFLQRDCLDNYSSVARDYNLLLQRELNGMQSQFRSFNPDAKIYYVDIYGPIADMIQAHEKFGFDEVNSGCCGSGYIEASVLCNKISNLCPDPSKYVFWDSIHPTEKAYHNLFLANVPKIDFIVNN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3002 368 Pfam GDSL-like Lipase/Acylhydrolase 39 355 IPR001087 GO:0016788
Lja6g3002 368 SUPERFAMILY SGNH hydrolase 166 354 - -
Lja6g3002 368 CDD SGNH_plant_lipase_like 37 352 IPR035669 -
Lja6g3002 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 365 - -
Lja6g3002 368 PANTHER GDSL ESTERASE/LIPASE EXL3 11 365 - -
Lja6g3002 368 Gene3D SGNH hydrolase 25 359 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3002 Lja-Chr6 58794711 58799871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3002 15 354 Pollen Coat Proteome AT1G75910 34.943 6.46e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3002 - - gmx:100788326 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3002 6 58794711 58799871 Lja6g3002 6 58794711 58799871 ECH