Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3001 ATGGAGTTAATGGTGAAAGTAGTACTACTGGCACTGGCCATAATGATGCCATGGTGTTCATTTGCTGTGGACATTCAACTAGCGAGGCAATGGGCAGCTAAGAGCAATGTGAGTTGCATCCTGGTTTTTGGAGATTCAAGTGTTGATCCTGGCAACAACAATGTGCTTCGCACCTCCATGAAAAGCAACTTTCCTCCTTATGGGAAGGACTTCTTTAACAGCCTCCCCACAGGAAGGTTTTGTAATGGGAGACTTGCCACAGACTTCATTGCTGAAGCATTGGGGTACAGACAAATGCTTCCGGCATTTCTTGACCCAAATTTGAAGGTTGAAGATCTGCCATATGGGGTTAGTTTTGCATCAGCAGCCACAGGCTTTGATGATTACACTGCTAATGTTGTGAATGTTCTGCCTGTTTCGAAACAGATCCAGTATTTTATGCATTATAAGATCCACTTGAGAAAATTGTTGGGTGAAGAAAGGGCAGAATTCATCATAAGAAATGCATTGTTTATTGTTAGTATGGGTACAAATGACTTCCTGCAAAACTATTTCATTGAACCTGCTCGCCCCAAGCAATTCAGCTTGCTCAAATTTCAGAATTTCTTGCTCCGCCGCATGTCTAAGGATATTGAGGTGATGCATAGGTTGGGAGCCAGGAGGTTGGTTGTTGTTGGGGTCATTCCTTTGGGATGCATTCCACTTACCAAGGCCATTATGGGCCAGAATGATACCTGTGTAGCAAGTTTGAACAAAGTAGCTTCCTCATTCAATGCAAAACTATTACAGCAAATCTCTAACTTAAAGGCAAAACTGGGCTTACAGACTTATTATGTTGATGTTTATGGTATGATCCAAAGTGCAGTAATGAACCCTAAAAAATACGGTTTTGAGGAAGGATCAAAGGGATGTTGCGGGTCAGGGATATATGAATATGGCGATACATGCAGAGGAATGAGTACTTGTTCAGAACCAGACAAATACGTATTCTGGGATGCTGTTCATCCAACACAAAAGATGTACAAGATTATAGCTGATGATGTCATTGAATCTGTTACTAAAGAACCCATTCACAGCACAACCAATTAA 1089 0.416 MELMVKVVLLALAIMMPWCSFAVDIQLARQWAAKSNVSCILVFGDSSVDPGNNNVLRTSMKSNFPPYGKDFFNSLPTGRFCNGRLATDFIAEALGYRQMLPAFLDPNLKVEDLPYGVSFASAATGFDDYTANVVNVLPVSKQIQYFMHYKIHLRKLLGEERAEFIIRNALFIVSMGTNDFLQNYFIEPARPKQFSLLKFQNFLLRRMSKDIEVMHRLGARRLVVVGVIPLGCIPLTKAIMGQNDTCVASLNKVASSFNAKLLQQISNLKAKLGLQTYYVDVYGMIQSAVMNPKKYGFEEGSKGCCGSGIYEYGDTCRGMSTCSEPDKYVFWDAVHPTQKMYKIIADDVIESVTKEPIHSTTN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3001 362 PANTHER GDSL ESTERASE/LIPASE EXL3 7 354 - -
Lja6g3001 362 SUPERFAMILY SGNH hydrolase 169 351 - -
Lja6g3001 362 CDD SGNH_plant_lipase_like 39 349 IPR035669 -
Lja6g3001 362 Pfam GDSL-like Lipase/Acylhydrolase 40 347 IPR001087 GO:0016788
Lja6g3001 362 Gene3D SGNH hydrolase 25 356 IPR036514 -
Lja6g3001 362 PANTHER GDSL ESTERASE/LIPASE 7 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3001 Lja-Chr6 58792096 58794443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3001 32 354 Pollen Coat Proteome AT1G75930 36.036 2.42e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3001 - - gmx:100812614 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3001 6 58792096 58794443 Lja6g3001 6 58792096 58794443 ECH