Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2995 ATGGGGTCTGAAGACAAACATGGTGAAGAATCAGTAAGTATAGGCCTTAAACTCATGCTGATTGCAGCTTTCTCTTTGTTTGGGATGATCTTGTTCATTATCTTTCTCCATTTTTGTGCAATACATCTCATAAGACGCCGACAGAGAAGACGCCGAATTGACTACCTTCTTCATTACATCAACACACAAATTGGACCAGTTGATGTGAGTTCAGTTCTTGAGGCACCCTATCATGGCCTTGACCCTTTGATCCTAGCCTCTTTGCCTAAACTCTTGTACAAGCAAACAGAGCAGTTCAACCAAGGTGAAGAAGCTACAGAGTGCTCTGTTTGCTTAGGCACTATTGTGGGAGATGAAACTATAAGGGTGCTGCCAAATTGTAAGCACATTTTTCATGTTGATTGTGTTGATAAATGGTTTAATGCTAACACCACATGCCCAATTTGCCGTGCTGTGGCTGAACCCAAAGTCCAGTCAGGGCATGGTAATTTGGGCATGAGGGTCCAAGCACAACCCACAGCACCACCTGTAGAGGGTGGTGATGAGCCACATGATTGTGATGATTTGGAGAAAGTGGGTTGTTCAGGGTTGAGAATAGGATCTCTTGATAGAATGGTTAGTAGCAAGGAAAGGTCATTGAGAAGGACTCAGAGCACTAATGAGTCTGCCATAGATGATATAGAAAAACACTAA 693 0.4315 MGSEDKHGEESVSIGLKLMLIAAFSLFGMILFIIFLHFCAIHLIRRRQRRRRIDYLLHYINTQIGPVDVSSVLEAPYHGLDPLILASLPKLLYKQTEQFNQGEEATECSVCLGTIVGDETIRVLPNCKHIFHVDCVDKWFNANTTCPICRAVAEPKVQSGHGNLGMRVQAQPTAPPVEGGDEPHDCDDLEKVGCSGLRIGSLDRMVSSKERSLRRTQSTNESAIDDIEKH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2995 230 SUPERFAMILY RING/U-box 95 156 - -
Lja6g2995 230 MobiDBLite consensus disorder prediction 206 230 - -
Lja6g2995 230 PANTHER RING FINGER DOMAIN-CONTAINING 1 229 - -
Lja6g2995 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 155 IPR013083 -
Lja6g2995 230 SMART ring_2 108 149 IPR001841 -
Lja6g2995 230 Pfam Ring finger domain 107 150 IPR001841 -
Lja6g2995 230 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Lja6g2995 230 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2995 Lja-Chr6 58748203 58748943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2995 14 230 C3H Transcription Factor Family AT2G42360 32.627 3.90e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2995 K19038 - gmx:100786701 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2995 6 58748203 58748943 Lja6g2995 6 58748203 58748943 ECH