Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2994 ATGGGTTCAGGTCATTGGTTTAAGTCAATAATTAGATTAAGAAAATCAAAAGGAGGAAGATCAAAGAAAGCAAAGGGTGCCTTAGCTCCAGAGAAGGCAAGTGCATTGAAGCTGAGTGATTATACAGGAAAAGAGTCTGGTGATTTGGAAAATGGTATTACAAATGAAAATCTTGTGTCGGTTGAAACTATAGCTGCAATAAGGATCCAGACGGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGTCGCTTGAAAAGATTCACAAAACTGAAGGTCCAAATACAAGGTTACTCTGTTAAAAAGCAAGCAGGTACAACTATAACATATCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGCTCGCCGAATCTGCATGGTGACAGAAGACAAGGTCAGGCAGAGGAAACTAGAGTCTCAACTAAAACTTGAGGCAAAGCTCCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAACCCTTGGAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAACGTTGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAAATGCTAGGCAATTGTGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGATCGCTGGATCGCTGCTCGGCCATGGGAAAGCCGCATTCATAACATTAACCTGAAGAAATCTCCAAGCCCAAACAAACAGTCAAGCAAGGTTCAGAAGGATAAGAGTATATCAACACCTAAAACCCCAGTTTCAGCTACACCTAATTCATCCAATGCAAAAGGGACTCCTCCTTTGGAGAATGGAAAAGGGACTACAAAAGCTAGGAGATTGACATTGTTTCATTGTCTTTTATCTGATACGGTTACCACGTTTCTGTATATCATCACTTCAACAACGTTATTGATTGTAAATAATAACTTGCAAGTTTGTAAAATCTTGGAAATTTTTTTGATGGCGATGGGTTCAAACAAGGTTCCAGAGAGATTACAAGCTCTGCTTCATCACTTTCGATCTTCAAACTCGCTACCCAACATCACCAATCTCAGCCGCGACCAGTTCAATTCGAATCCGACAAAGAGAGCCGCAGTTCTCATCTGTCTCTTCGAAGATTCCGATGGCAATCTGCGAGTGTTTCTCACCCAGCGAGCTTCTTCTCTGTCAACACACTCCGGTGAGGTTGCTTTGCCCGGTGGCAAGAGGGAAGAAGGTGATGCTGATGATGTAGAAACTGCGTTGAGGGAGGCTAAGGAGGAGATTGGTCTGGATCCTTCTCTTGTTACTGTCATCACTCTCCTTGAACCTTTCCATACCAAGTATGGCATTACAATAATACCCGTTGTTGGAATGCTGTCCGACAAGGATGTATTTTCCCCAGTTTTAAACCCAGCTGAAGTAGAAACTATATTTGATGTTCCACTAGAGATGTTCCTCAAGAATGATAATAGGAGGGCTGATGAAAGAGAATGGATGGGAGAGAAGTACCTTCGACATTATTTCGATTATGAGGTTGAGAATAAGAAGTATGTCATCTGGGCTGTAACTGCAGCAATGTTAATTAGGGCAGCTACCGTTATACTTCAGCGACCGCCAGCTTTTCTGGAGAAGAGGCCTAAAATCTGGGGAGGAATTACTGAAAGTGACAGGATAATGCTACAGAATAGTTCTTCTAAACAATGA 1710 0.4298 MGSGHWFKSIIRLRKSKGGRSKKAKGALAPEKASALKLSDYTGKESGDLENGITNENLVSVETIAAIRIQTAFRAYKARKALRRLKRFTKLKVQIQGYSVKKQAGTTITYLHSWSKIQAEIRARRICMVTEDKVRQRKLESQLKLEAKLHDLEVEWSGGSETMEETLGRIHQREEAAVKRERTLAYAFSHQWRANSSQSQMLGNCELGKANWGWSWKDRWIAARPWESRIHNINLKKSPSPNKQSSKVQKDKSISTPKTPVSATPNSSNAKGTPPLENGKGTTKARRLTLFHCLLSDTVTTFLYIITSTTLLIVNNNLQVCKILEIFLMAMGSNKVPERLQALLHHFRSSNSLPNITNLSRDQFNSNPTKRAAVLICLFEDSDGNLRVFLTQRASSLSTHSGEVALPGGKREEGDADDVETALREAKEEIGLDPSLVTVITLLEPFHTKYGITIIPVVGMLSDKDVFSPVLNPAEVETIFDVPLEMFLKNDNRRADEREWMGEKYLRHYFDYEVENKKYVIWAVTAAMLIRAATVILQRPPAFLEKRPKIWGGITESDRIMLQNSSSKQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2994 569 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 329 558 - -
Lja6g2994 569 Coils Coil 409 429 - -
Lja6g2994 569 CDD CoAse 370 530 IPR045121 GO:0010945
Lja6g2994 569 MobiDBLite consensus disorder prediction 233 276 - -
Lja6g2994 569 Pfam NUDIX domain 370 487 IPR000086 -
Lja6g2994 569 ProSiteProfiles IQ motif profile. 62 90 IPR000048 GO:0005515
Lja6g2994 569 SUPERFAMILY Nudix 365 532 IPR015797 -
Lja6g2994 569 ProSiteProfiles Nudix hydrolase domain profile. 369 503 IPR000086 -
Lja6g2994 569 MobiDBLite consensus disorder prediction 232 281 - -
Lja6g2994 569 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 343 534 - -
Lja6g2994 569 PANTHER NUDIX HYDROLASE 329 558 IPR045121 GO:0010945
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2994 Lja-Chr6 58729850 58735433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2994 1 290 IQD Protein Family AT2G33990 50.345 2.21e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2994 - - lja:Lj6g3v2006040.1 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2994 6 58729850 58735433 Lja6g2994 6 58729850 58735433 ECH