Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2989 ATGGAAACCATCATCAAAACCACAGAGCGTGTTCTCATCTTTCCTTCTTCCCCTCCCTTCCTCAACGACCACTCCCTCCCTCTCTCCCACCTCGACACCGACCGCAACCTCCACCTCACCTTCCGCTACCTCCGCGCTTACGTCACCACCGCCGACACTACCTCCGACCCCTTCCACGTCATCTCCTCCTCCATCTCCCAAGCTCTTTTCCACTACTACCAACTCGCCGGCACGCTCCGCCACCGCCAGGACCACCGCCTCGAGCTTTGGTGCGCCGCCGGCCAAGGCGTCCCACTCATCCGTGCCACCGCGGACTTCACTCTGGATTCAGTTAACTACCTCGATGACCCGAAGCCCGATTTCATTGAGCAGCTGGTGCCTGACCCGGGACACGAAGAGGGGTTAGAGCACCCGTTCATGGTTCAGGTGACGGTGTTCAAGTGCGGCGGGTACACTCTCGGCGTGGCGACTCACCACGCGGTCTGCGACGGGATGGGTGGGGGGCTGTTTTTTAACACGGCGGCTGAGCTGGCTCGTGGGGCGACCCGGATAACGGTGGAGCCGGTGTGGGAGAGGGAGAGATTGTTGGGTCCTCGTGACCCGGCCCGAGTGGATTCACCGTTGATAGGGGAGTTTCTGGGTTTGGATAAGGGTATTTTGCCTTATAATGAGGACATTGGTCCTGTTGTGAGAGAGTGCTTTGATGTGAGGGATGAGTGTTTGGATAAGTTTAAGAAGGACTTGTTTCAACAATCTGGATTGAAATTCACTACTTTTGAGGCTCTTGGTGCTTACATTTGGAGATCCAAGGTTAGGGCCTCAGGAGTCCAGGGTCATGAGAAGGTTAAGTTTGCATACTCAATCAATATTAGGAGACTAGTAAAGCCATCACTACCTGCTGGATATTGGGGTAATGGTTGTGTTCCAATGTATGCGCAGCTGAGTGCCAAAGATTTGATAGAACAACCCATTTGGGAAACAGCAGAGCTAATCAAAAAGAGTAAAAGCAATGTTACTGATGAGTATGTTCACTCCTTCATAGATTACCAGGAGTTGCATTTTGCGGATGGGATCACCGCAGGTAAAAGGATTAGTGGCTTCACTGATTGGAGACACTTAGGCCATTCAACTGTGGACTTTGGTTGGGGAGGGCCAGTTACTGTTTTGCCACTTGGAAGGAACTTACTTGGGAGTGTTGAGCCTTGCTACTTTTTGCCTTATTCAACAGCCAGTGCAGGGAAGAAGGAGGGGTTCAAGGTTTTAATCACTTTGGCAGAGGCTGCGGTTCCTGCTGTGACAGAAGACATGCAAATGTTTGCCAGTATCCAAGAACAAGTTGTTTGA 1344 0.5201 METIIKTTERVLIFPSSPPFLNDHSLPLSHLDTDRNLHLTFRYLRAYVTTADTTSDPFHVISSSISQALFHYYQLAGTLRHRQDHRLELWCAAGQGVPLIRATADFTLDSVNYLDDPKPDFIEQLVPDPGHEEGLEHPFMVQVTVFKCGGYTLGVATHHAVCDGMGGGLFFNTAAELARGATRITVEPVWERERLLGPRDPARVDSPLIGEFLGLDKGILPYNEDIGPVVRECFDVRDECLDKFKKDLFQQSGLKFTTFEALGAYIWRSKVRASGVQGHEKVKFAYSINIRRLVKPSLPAGYWGNGCVPMYAQLSAKDLIEQPIWETAELIKKSKSNVTDEYVHSFIDYQELHFADGITAGKRISGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCYFLPYSTASAGKKEGFKVLITLAEAAVPAVTEDMQMFASIQEQVV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2989 447 Gene3D - 1 208 IPR023213 -
Lja6g2989 447 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 5 440 - -
Lja6g2989 447 Pfam Transferase family 5 437 - -
Lja6g2989 447 Gene3D - 223 436 IPR023213 -
Lja6g2989 447 PANTHER ACYL TRANSFERASE 4 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2989 Lja-Chr6 58709962 58712686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2989 49 392 Monolignol Biosynthesis Gene Families AT5G48930 30.387 9.43e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2989 - - gmx:100817021 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2989 6 58709962 58712686 Lja6g2989 6 58709962 58712686 ECH