Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2962 ATGGCATCATCCAAGCAGCAACGTGAAAACTTAGTCTACATTGCCAAGTTCACCAAACAAGCTGAACGCTATGAAGATATGGTGGATGCAATGAACAATGTGGTGAGAATGAATGTTGAATTGACAGTTGAAGAACGAGATCTTTTTGCATATGCGTACACGAATGTAGTGCGCAAACGCAGGGAGTCGCGGAAAATCTTGTCCTTGATTGAGAAGAAGGAAGAATCAAAAGGGAATGATTTGAATGTGAATAGGATTAAGGAGTCCATGAAAAAGTTGGAATCAGAGTTGTCTACTATCTGCACCGATATCATAACCCTCATTGATCAACATCTCCTTCCACAGTCCTCGGGTGAATCCAGTGTCTTATACTACAGAATGAAAGGTGACTGTTACCGCTATTTGGCTGAACTTAAGAGAGGCGATGAGAGAAAAGAGGCGGTTGATCAGTGCTTGAAAGCTTACCAGGAAGCTTCCACCATAGCAAAAGCTGAGTTACCTGCCGCACATCACATTAGAGCGGGTGTGGCTTTGAACTTCTCTGTCTTCTATTATGAGATTTTGAAATCTCCTGAAAGGGCTAATTACCTTGCCGAGCAGGCAATTTATGAAGCACGCTCCGAGTTGGTTGCTCTCGATGAGGATGCTTCCAAAGACAGCTTAGCCATTTTCAAGCTTTTAAGGGAAAACATCGACTTATGGGAAGAACGAGGATTTTCCTATAACTGA 729 0.428 MASSKQQRENLVYIAKFTKQAERYEDMVDAMNNVVRMNVELTVEERDLFAYAYTNVVRKRRESRKILSLIEKKEESKGNDLNVNRIKESMKKLESELSTICTDIITLIDQHLLPQSSGESSVLYYRMKGDCYRYLAELKRGDERKEAVDQCLKAYQEASTIAKAELPAAHHIRAGVALNFSVFYYEILKSPERANYLAEQAIYEARSELVALDEDASKDSLAIFKLLRENIDLWEERGFSYN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lja6g2962 242 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lja6g2962 242 Gene3D - 1 239 IPR036815 -
Lja6g2962 242 SUPERFAMILY 14-3-3 protein 7 236 IPR036815 -
Lja6g2962 242 Coils Coil 14 34 - -
Lja6g2962 242 PIRSF 14-3-3 2 240 IPR000308 -
Lja6g2962 242 PANTHER 14-3-3 PROTEIN 4 235 IPR000308 -
Lja6g2962 242 SMART 1433_4 8 238 IPR023410 -
Lja6g2962 242 Pfam 14-3-3 protein 15 235 IPR023410 -
Lja6g2962 242 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2962 Lja-Chr6 58559207 58560471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2962 3 234 14-3-3 family AT2G42590 57.940 2.61e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2962 K06630 - gmx:100807980 292.352