Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2949 ATGGGAATGAGATGGAACGCATTTGGAATTTGGTTCAAGTTTTATGTTTGCTTGATTTCTGCGTGGGGAGTCCGAGAGTGTTGGAAATCATTCTTCTATCTCGAGGTTTTGGTTTTGTATACTTATTTATTAATTAATTTCTTTTTGGTTTCATCTGGATTGGAAAATGCAGGATTGGCTTTATTAGAGTTCCGGACAAGAATCACTTTTGATCCTTATGTTGCTTTGGCAAATTGGAATCCAAATGATTGTGACCCCTGCAAGTGGTTTGGTGTTTATTGTGTCGATGGTGAAGTGCAAATGCTGGACCTAAACGGGCTATCTTTGAAAGGGACATTAGCTCCTGAGCTTGGGAGGCTTAGTCACTTAAAATCTCTTGTGTTATGCAAGAATAACTTTTACGGTGCCATTCCCAAAGAGCTTGGAAATCTAGCCAAGCTGGAGTTGTTGGATTTAAGGGAGAATAACTTGTCAGGAAGCATCCCAACTGAAATTAACAGCATGTTATTGCTAAAACACCTGCTGCTTTGTGACAATAAAATTGAAGGCGATGATTCTCAAGGTCAAAGAAGAATCAGATTTCCCTCTAAATTGCTACTTGTTGACGATTGTTCATCACCTTTGACAACTTTATTTGCTTGCATGAATAGAAAGTTTGGACACTGTGTGTGGCAGAGCAACTTCAAGCAATGGGACAAATCAGATTCATTGATAGTTCCAATTAAAGTAGCAATTGTGAAATACCTCAACGCCTTTGTGCTGCCACTGTTCAAGTTGCTCGACCATGAAGAGAAATGTTATGACCTTCTGCCTAGTTCTAAAGAGCCAGATATTTCCCAGAACATACCAAATCTTGTCAATTCTGCACGTCGAAAGTTACTTGCTCAGTCCAGTAACCTTGCAGCTGCGCCTTATAGTGGTGGACCTACAATAGAGTTCAGTTCTGTTCCAACTAGCCTGAGTAGTGGAGCTTTTCCAGCTGTGCCAAATGACAATAAGAAGAAGAATCAGCCACCTGCACCACTGCATTCACCTCCACATGATGCTTCTGCAAGTCACCAACATTCTACCAATGGTGCTTCTAAAAATTTGTGGAAGTATATAATAATTATTATTGTTGTAGCTGTGTTGGTCGCTGTTATCATAATTCTTCTTTGCATTTGGCGAAAACGAGCGGCAAAGATCATATCCCCTTGGAAGACAGGAATAAGTGGACAGCTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATAGAGGAGAACTAGAGACAGCATGTGAGGATTTTAGCAATATCATTGTTGGTTTTGAACTTTGCATCATATACAAAGGAACACTGTCCAGTGGAGTCGAGATTGCTGTGGTTTCTACTCAAGTTACTTCTCGCGAAGATTGGACAAAGAACATGGAGACGAACTACCGAAAAAAGATTGCTACTTTATCCCGCATAAACCATAAGAACTTCATCAATCTTATTGGATACTGTGAGGAAGAAGAACCATTCACAAGGATGCTGGTGTTTGAGTATGCTCCAAATGGAAACTTATTTGAGCATTTGCATGTAAGGGAAGTTGAACGTCTTGATTGGAGTGAAAGGATGAGGATTATCATGGGCAGTGCTTATTGTCTTCAGTACATGCACCATGATCTAAATCCACCAATAGCTCATACCAAACTTTCTTCAAATATGATATTCTTAACAGATGATTTCGCCGCTAAGTTTGCAGAGGTCACCTTTGCAGATATTGTATCACCACCAACCAAGACAACAGGGGGTGATTCAAAGAAATCTGATCATTCCCGTGTTGATCTAGAAACCAATGTCTACAACTTTGGAGTATTGCTGCTTGAAATCATTTCTGGAAAATTGCCTTACTCTGAAGAACAAGGCAATCTTGTGAACTGGGCTGCTGATTACTTGAACGACAAGCGAAGCATTAGCTATTTGATTGATCCCAGCCTGAAATCTTTCAAGGATAATGAACTTGATGTTATATGTGAGGTGATCCGAGATTGTATCCAACCTGATCCAAGGCTAAGACCCACAATGAGAGAGATAGCTTCCAAGTTGAGGGGAGTACTTGGTGTGTCACCGGAGCAAGCGGTCCCGAGACTTTCTCCGCTGTGGTGGGCTGAACTGGAGATCTTGTCAGTGGAGGCCACTTGA 2169 0.4108 MGMRWNAFGIWFKFYVCLISAWGVRECWKSFFYLEVLVLYTYLLINFFLVSSGLENAGLALLEFRTRITFDPYVALANWNPNDCDPCKWFGVYCVDGEVQMLDLNGLSLKGTLAPELGRLSHLKSLVLCKNNFYGAIPKELGNLAKLELLDLRENNLSGSIPTEINSMLLLKHLLLCDNKIEGDDSQGQRRIRFPSKLLLVDDCSSPLTTLFACMNRKFGHCVWQSNFKQWDKSDSLIVPIKVAIVKYLNAFVLPLFKLLDHEEKCYDLLPSSKEPDISQNIPNLVNSARRKLLAQSSNLAAAPYSGGPTIEFSSVPTSLSSGAFPAVPNDNKKKNQPPAPLHSPPHDASASHQHSTNGASKNLWKYIIIIIVVAVLVAVIIILLCIWRKRAAKIISPWKTGISGQLQKAFITGVPKLNRGELETACEDFSNIIVGFELCIIYKGTLSSGVEIAVVSTQVTSREDWTKNMETNYRKKIATLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNLFEHLHVREVERLDWSERMRIIMGSAYCLQYMHHDLNPPIAHTKLSSNMIFLTDDFAAKFAEVTFADIVSPPTKTTGGDSKKSDHSRVDLETNVYNFGVLLLEIISGKLPYSEEQGNLVNWAADYLNDKRSISYLIDPSLKSFKDNELDVICEVIRDCIQPDPRLRPTMREIASKLRGVLGVSPEQAVPRLSPLWWAELEILSVEAT* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2949 722 Pfam Protein tyrosine and serine/threonine kinase 444 691 IPR001245 GO:0004672|GO:0006468
Lja6g2949 722 ProSiteProfiles Protein kinase domain profile. 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2949 722 Gene3D Transferase(Phosphotransferase) domain 1 511 701 - -
Lja6g2949 722 PANTHER LRR RECEPTOR-LIKE KINASE 1 722 - -
Lja6g2949 722 SUPERFAMILY Protein kinase-like (PK-like) 441 691 IPR011009 -
Lja6g2949 722 MobiDBLite consensus disorder prediction 327 355 - -
Lja6g2949 722 Pfam Leucine rich repeat N-terminal domain 56 94 IPR013210 -
Lja6g2949 722 SUPERFAMILY L domain-like 60 211 - -
Lja6g2949 722 Gene3D Ribonuclease Inhibitor 54 221 IPR032675 -
Lja6g2949 722 PANTHER PROTEIN MALE DISCOVERER 2 1 722 - -
Lja6g2949 722 Gene3D Phosphorylase Kinase; domain 1 401 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2949 Lja-Chr6 58455636 58460147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2949 99 691 Receptor kinase-like Gene Family AT5G49660 26.730 3.80e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lja6g2949 PK_Tyr_Ser-Thr 6.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2949 - - adu:107468254 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2949 6 58455636 58460147 Lja6g2949 6 58455636 58460147 ECH