Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2899 ATGGATGCACCTAAAGATCATCAAGATGTTGTGAATGTGGATGTCGAAGCTGCCAAAGATCTGCTCAATTCATCTGGTTACCGTTATCTCGATGTGAGAACAGTTGAGGAATTCAACAAAAGCCATGTTGATAATGCTTTAAATATCGCCTATATGTTTAGCACAGAAGCAGGAAGGGTGAAAAATCCTGATTTTCTTGACCAGGTAGCAGCAGTATGCAAGAGTGAGGATCACTTGCTTGTGGCGTGCAACAGTGGAGGAAGAGGACGCAAAGCTGTTATAGATTTGCTTGATTCAGGATATAAACATGTTTTTAACATGGGGGGAGGCTACTCTGCGTGGGTGGATGCTGGATTTGCTGGGGACAAGCCAGCAGAAGAGCTCAAAACTGCTTGCAAGTTCCGTCCTTGA 411 0.4428 MDAPKDHQDVVNVDVEAAKDLLNSSGYRYLDVRTVEEFNKSHVDNALNIAYMFSTEAGRVKNPDFLDQVAAVCKSEDHLLVACNSGGRGRKAVIDLLDSGYKHVFNMGGGYSAWVDAGFAGDKPAEELKTACKFRP* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2899 136 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
Lja6g2899 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Lja6g2899 136 SMART rhod_4 13 120 IPR001763 -
Lja6g2899 136 Gene3D - 2 120 IPR036873 -
Lja6g2899 136 CDD RHOD 18 115 - -
Lja6g2899 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
Lja6g2899 136 Pfam Rhodanese-like domain 16 116 IPR001763 -
Lja6g2899 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2899 Lja-Chr6 58111291 58112845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2899 8 127 Sulfurtransferasese or Rhodanese AT5G66170 50.000 1.54e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2899 K22547 - gmx:100794624 236.113