Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2892 ATGTCGAGATCATTCCAAATGACCAAGGCAGACGCACCACCCCTTCCTGCGTTGCCTTCACTGACACTCAAAGATAGAATAGAGTCCATCTCCCTCCATGGCTACAAACTGAGACGCAGATGTAGAGCTAACTGGAACTCAGAGTCCGGTATTAGAGTTTTGATCAAAGTGTACGAAGGAGAAGAAAGCAGGACTAATGACAACTTGTTCCTCGGGGAGATAGAGGTGCCAGCGTTGCCTCAGATCAATGTTTGTTTTGAAGTAGATTCTGGTGGCATTGTGAAGGTCACTGCAGAAGGTAAGACCATGAGGTTGGAAGGAAGGCTAAGCGCGGAAGAGATAGGAAGAGATGCAGAGTGGTATAAGGAGAAGGACACGTTTGAGTTTTCTGCTCATGAGATGAGCAACAGATTGAAGAAGCTTGAGAATTCTGCTTATGAGACGAGTAACAGTTTGAAGAAGCTTGAGAAGGGTTTGGAGGTTGTGTTGGAGTCCATAGATATATAG 507 0.4556 MSRSFQMTKADAPPLPALPSLTLKDRIESISLHGYKLRRRCRANWNSESGIRVLIKVYEGEESRTNDNLFLGEIEVPALPQINVCFEVDSGGIVKVTAEGKTMRLEGRLSAEEIGRDAEWYKEKDTFEFSAHEMSNRLKKLENSAYETSNSLKKLEKGLEVVLESIDI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2892 168 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 52 164 - -
Lja6g2892 168 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 50 116 IPR029047 -
Lja6g2892 168 Pfam Hsp70 protein 52 160 IPR013126 GO:0005524|GO:0140662
Lja6g2892 168 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 39 161 IPR029047 -
Lja6g2892 168 PANTHER HEAT SHOCK PROTEIN 70KDA 52 164 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2892 Lja-Chr6 58060066 58062014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2892 53 153 Calmodulin-binding Proteins AT1G16030 45.000 4.48e-18 78.6