Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2883 ATGGCATTCAACAACATCATTATTTCTGCAACATGTCTCGTGCTCACCCTCCTCCTTCCATTGGCCTCATGCACCAAAAACAAACAGATTTATGTAGTTGAGTTTGGAGAGCACTATAGTGAAGGAGATAAATTAACATCTCATGAAATAGAGAATACTCATCATTCTTATCTGCTTTCGGTGAAAGGAACTGAAGAGGAAGCTCAAGCTTCCCTTCTTTATAGCTACAAACACACTATCAATGGCTTTGCAGCATTTCTTACCCCAAAAGAAGCCAATATCTTCTCAGAAATGGAGGGAGTGGTCTCTGTGCGTGAGAGCCAGTCAAGGATCTACTCTTTGCACACCACAAGGTCATGGAAGTTTGTGGGGTTAGATGAGATTTTAAATCCTTATTGGGAAGAAAAATCTAATCAGACAGATGGAGACTTGCTAGAAAAAGCAAAATATGGGGAAAATATCATAGTAGGAATGATTGATAATGCCAGTGCCTTTTCTCTTTGGTTTGTGTGA 513 0.3977 MAFNNIIISATCLVLTLLLPLASCTKNKQIYVVEFGEHYSEGDKLTSHEIENTHHSYLLSVKGTEEEAQASLLYSYKHTINGFAAFLTPKEANIFSEMEGVVSVRESQSRIYSLHTTRSWKFVGLDEILNPYWEEKSNQTDGDLLEKAKYGENIIVGMIDNASAFSLWFV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2883 170 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 22 161 - -
Lja6g2883 170 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 161 IPR045051 -
Lja6g2883 170 Pfam Peptidase inhibitor I9 31 110 IPR010259 -
Lja6g2883 170 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 115 IPR037045 -
Lja6g2883 170 SUPERFAMILY Subtilisin-like 7 161 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2883 Lja-Chr6 57964616 57966463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2883 22 162 Subtilisin-like Serine Gene Family AT5G45650 52.703 2.24e-41 145