Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2878 ATGGCATTCAACAACATCATTATTTCTGCAACATGTCTCGTGCTCACCCTCCTCCTTCCATTGGCCTCATGCACCAAAAACAAACAGATTTATGTAGTTGAGTTTGGAGAGCACTATAGTGAAGGAGATAAATTAACATCTCATGAAATAGAGAATACTCATCATTCTTATCTGCTTTCGGTGAAAGGAACTGAAGAGGAAGCTCAAGCTTCCCTTCTTTATAGCTACAAACACACTATCAATGGCTTTGCAGCATTTCTTACCCCAAAAGAAGCCAATATCTTCTCAGAAATGGAGGGAGTGGTCTCTGTGCGTGAGAGCCAGTCAAGGATCTACTCTTTGCACACCACAAGGTCATGGAAGTTTGTGGGGTTAGATGAGATTTTAAATCCTTATTGGGAAGAAAAATCTAATCAGACAGATGGAGACTTGCTAGAAAAAGCAAAATATGGGGAAAATATCATAGTAGGAATGATTGATAATGGGGTGTGGCCAGAGTCAAAGAGCTTCAGTGATGAAGGGATGGGGCCTGTTCCACAAAAATGGAAAGGAGTGTGCCAAAATGGAACTGCTTTCGGTTCATCTCAATGCAATAGAAAAATCATTGGAGCAAGGTATTACTTACGTGGTTATGAAAGTGAATTTGGCCCTCTAGATGAAAAGGAGGATTACAAATCAGCTCGTGACAAAGATGGGCATGGAACTCATACAGCTTCCATAGTTGCGGGCCGTGTGGTTCCAAAAGCCTCGGCCCTTGGAGGCTTCGCGAGAGGCACAGCCTCTGGCGGAGCCCCCTTAGCCAGGCTTGCTATATACAAAGCATGTTGGCCACTCAAAGGGAAATCAAAAGATGAAGGCAACATATGCACAGATATTGATCTTCTTAAAGCTATAGATGATGCCGTTGGCGATGGTGTTGATATTTTAAGCATTTCCATTGGGTTCAAAACACCTCTCCCTTATGAGGATGATGTCATTGCTAAGAGCACATTACATGCTGTTAAGAAGAACATTGTGGCGGTTTGCAGTGCTGGGAACTTAGGTCCATTGCCTCAAAGGTTGTCAAACCCTGCTCCATGGATCATCACTATTGGTGCTAGTACTGTGGACCGTTCCTTCCTTGCTCCAGTTAAGCTGAGTAGTGGCACAATCATTGAGGGTCGATCCATTACTCCACTACACATGGAAAACAGCTTCCGCCCATTGGTTCTTGCTAGAGATGTTGTGCATCCAGGCGTGGCTAGTGAAGATTCAGGATTTTGCCTAGACAATAGCCTTCAACCAAACAAGGTTCAAGGGAAGATAGTTCTCTGCATGAGAGGGAAAGGGGGCAGAGTGAAAAAAGGCTTGGAAGTTCAAAGGGCAGGTGGTGTTGGTCTCATCCTTGGGAACAATAAAACTTATGGAAATGATGTACCCTCTGATCCTCATTTCATCCCAGCCACTGCTGTGTCCTATGAGAATGTCTTAAAACTTATTAACTATGTCCATTCCTCTCCTAATCCAATGGCTCAGATTCTGCCAGGAAGAACAGTGTTAGAATCCAAACCAGCACCCTCCATGGCCTCCTTCTCTAGTAGAGGTCCAAATATAATTGACCCTAACATTTTGAAGCCTGATATTACAGCACCTGGAGTGGACATATTGGCAGCATGGACCCCTAAAGATGGCCCTACAAGAATGACATTTCAGGATAAACGAGTTGTTGAATACAATATCTTCTCTGGAACTTCAATGTCTTGCCCTCATGTTTCTGCAGCAGCAGCTCTTCTCAAAGCCATTCACCCTACTTGGAGCAGTGCAGCTATAAGATCTGCACTCATCACTACAGCCATAGCAATTGACAACACTGGTAATCCATTAACTGATGAAACTGGAAATCCTGCAACACCTTTTGCAATGGGTTCTGGTCACTTCAACCCCAAAAGAGCAGCAGATCCTGGACTTGTTTACAATGCCTCCTACACCGACTACCTTCTATACACTTGTAGCCTAGGAGTAACTCAAAAATTAAATGTTAGATATAATTGTCCAAAGTCAGTTCATGAACCTATAGATCTCAATTATCCATCCATACAAGTCCATAGACTCAATCACACTAGAACTATTAAGAGGACAGTGACCAATGTTGGTAGGAGCAGGAGTGTGTACAAGTTTATTGCAAAGTCACCTGAAGAATACTCCATTACAGCCACTCCAAAGTTACTGAAATTCAGTCATGTGGGGCAGAAAAAGAACTTCATCATCACTGTGACAGCAAACAGGGATAAGATACCAAAAGCCATGTTTGACTCTAACAAGTACTATTTTGGATGGTATGCTTGGACTGGGGAATATAATGTAGTAAGAAGCCCAGTGGCAGTGTCTTTTGCATAA 2376 0.4306 MAFNNIIISATCLVLTLLLPLASCTKNKQIYVVEFGEHYSEGDKLTSHEIENTHHSYLLSVKGTEEEAQASLLYSYKHTINGFAAFLTPKEANIFSEMEGVVSVRESQSRIYSLHTTRSWKFVGLDEILNPYWEEKSNQTDGDLLEKAKYGENIIVGMIDNGVWPESKSFSDEGMGPVPQKWKGVCQNGTAFGSSQCNRKIIGARYYLRGYESEFGPLDEKEDYKSARDKDGHGTHTASIVAGRVVPKASALGGFARGTASGGAPLARLAIYKACWPLKGKSKDEGNICTDIDLLKAIDDAVGDGVDILSISIGFKTPLPYEDDVIAKSTLHAVKKNIVAVCSAGNLGPLPQRLSNPAPWIITIGASTVDRSFLAPVKLSSGTIIEGRSITPLHMENSFRPLVLARDVVHPGVASEDSGFCLDNSLQPNKVQGKIVLCMRGKGGRVKKGLEVQRAGGVGLILGNNKTYGNDVPSDPHFIPATAVSYENVLKLINYVHSSPNPMAQILPGRTVLESKPAPSMASFSSRGPNIIDPNILKPDITAPGVDILAAWTPKDGPTRMTFQDKRVVEYNIFSGTSMSCPHVSAAAALLKAIHPTWSSAAIRSALITTAIAIDNTGNPLTDETGNPATPFAMGSGHFNPKRAADPGLVYNASYTDYLLYTCSLGVTQKLNVRYNCPKSVHEPIDLNYPSIQVHRLNHTRTIKRTVTNVGRSRSVYKFIAKSPEEYSITATPKLLKFSHVGQKKNFIITVTANRDKIPKAMFDSNKYYFGWYAWTGEYNVVRSPVAVSFA* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2878 791 Pfam Subtilase family 151 637 IPR000209 GO:0006508|GO:0008236
Lja6g2878 791 Gene3D Peptidase S8/S53 domain 153 658 IPR036852 GO:0004252|GO:0006508
Lja6g2878 791 Gene3D - 370 513 - -
Lja6g2878 791 Gene3D - 660 790 - -
Lja6g2878 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 23 788 - -
Lja6g2878 791 SUPERFAMILY PA domain 428 498 IPR046450 -
Lja6g2878 791 ProSiteProfiles Serine proteases, subtilase domain profile. 119 645 - -
Lja6g2878 791 PRINTS Subtilisin serine protease family (S8) signature 575 591 IPR015500 -
Lja6g2878 791 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Lja6g2878 791 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Lja6g2878 791 Pfam PA domain 418 492 IPR003137 -
Lja6g2878 791 CDD PA_subtilisin_like 377 506 - -
Lja6g2878 791 Pfam Fibronectin type-III domain 686 788 IPR041469 -
Lja6g2878 791 CDD Peptidases_S8_3 112 612 IPR034197 -
Lja6g2878 791 Pfam Peptidase inhibitor I9 31 110 IPR010259 -
Lja6g2878 791 SUPERFAMILY Subtilisin-like 115 649 IPR036852 GO:0004252|GO:0006508
Lja6g2878 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 576 586 IPR023828 -
Lja6g2878 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 788 IPR045051 -
Lja6g2878 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2878 Lja-Chr6 57935917 57941739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2878 22 791 Subtilisin-like Serine Gene Family AT5G45650 56.082 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2878 - - gmx:100793064 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2878 6 57935917 57941739 Lja6g2878 6 57935917 57941739 ECH