Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2868 ATGGGGAGAAACAGTGAACATAGGAAAACGTCGACGTTTGCATTGTATGTGGGAGTGGGTGAAGGAGAGGATGTTCAAGCCTTTTACTACTTCATTGAGTCAGAGAATAATCCTAAGGAGGATCCTCTCATGCTTTGGCTAACTGGTGGCCCCGGTTGCTCTGCCTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGCATTTAGATATGAGGAATACAATGGAAGTCTTCCTAACTTGGTCTTAAGGCCACACTCATGGACAAAGGTAAGTAACATTATATTTGTAGATTTGCCTGTTTTCACGGGCTTCACCTATGCAAGAACAGAATCTGTTGCTCAACGAAGTGACTCGTCATTAGCTCATCAAGTCCATCAATTTCTTAGGAAGTGGTTGGTTGATCATCCAAAATTTCTGTCAAATGAAGCTTACATTGGTGGCGATTCCTACTCTGGCATTCCTATTCCAGCAATAGTTCAAGAAATTTCACAAGGAAATAAAGAAGGGCTCCAACCATGGATAAATCTCCAGGGTTACCTCTTGGGGAATCCTGTGACAACTAGGACAGAAAAAAACTATGCAATCCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGAGTCACTGCAAAAAAATTGTGGGGGAGAGTATATAAATGTAGATACAAAAAATGTACTGTGTTCAAGAGATCTCAATTCATACAGTGAGGCTATATCTGGACTTAATACAGCACATATTTTGGACCTGAAATGTGAGTGGCTTGATAATGAAATTTCCTGGAGGAGATCTCTAATTAAGAAAGATCAATCAAAGTTCCTCAATACTCATCTCAAATTACCACCGTTAAATTGTCGGAGTTATGCATACTTCCTTTGCGCTTATTGGGCTAATGATGACAATGTTCGCAAAGCTCTACACATACATAAGGGAAGCATTGGGAAATGGCATCGTTGTAACTACAATGTACCTAACAAGATAGACATCTCTAGCAGCTTTGAGTATCATGTAAATTTGAGCAAAAAAGGCTATCGTTCACTAATATACAGTGGCGATCACGACTTGACCGTTCCGTTCTTGGCGACTCAAGCGTGGGTAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCAATGGCGTATAAATGACCAAATTTCCTTTCAACTTGTAAGTTGTGGCAACATAGTGCAGTTCCTTCCTGGATTTGAGGGACCTCTTCCCTTTGTGCTGGAAACTGGGTATGTGGGAGTGGGTGAAGGAGAGGATGTTCAAGCCTTTTACTACTTCATTGAGTCTGAGAATAATCCAAAGGAGGATCCTCTTATGCTTTGGCTAACTGGTGGCCCCGGTTGCTCTGCCTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGCATTTAAATATGAGGAATACAATGGAAGCCTTCCAAACTTGGTCTTAAGGCCACACTCATGGACAAAGGTAAGTAGCATTATATTTGTAGATTTGCCTGTTTTCACGGGCTTCACTTATGCCAGATCAGAATCTGCTCAACGAAGTGACTCGTCATTAGTTCATCAAGTCCATCAATTTCTTAGGAAGTGGTTGGTTGATCATCCAGAATTTCTATCAAATGAAGTTTACATTGGTGGCGATTCCTACTCTGGCATTCCTATTCCAGGAATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGCTCCAACCATGGATAAATCTCCAGGGTTACCTCTTGGGGAATGCTATAACAACTAGGAAAGAAAAAAACTATGAAATCCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGAGTCACTGCAAAAAAATTGTGGGGGAGAATATATAAATGTAGATACCAAAAATGTACTATGTTCAAGAGATCTCAATTCATACAGTGAGGCTACATCTGGACTTAAATCATCACATATTTTGGACCTGAGATGTGAGTGGCTTGATAATGAAATTTCCTGGAGGAGATATCTAATTAAGAAAGATCAATCAAAGTTCCTCAATACTCATCTCAAATTACCACCTTTAAATTGTCGGAGTTATGCATACTTCCTTTGCGCTTATTGGGCTAATGATGACAATGTTCGTAAAGCTCTACACATACATAAGGGAAGCATTGGGAAATGGCACCGTTGTACCTTCGATATACCTAACAAGAGAGACATCTCTAGCAGCTTTAAGTATCATGTAAATTTGAGCAAAAAAGGCTACCGTTCACTAATATACAGTGGGGACCATGACTTGCTCGTTCCGTTCTTGGCGACTCAAGCATGGATAAGATCTTTGAACTACTCTATTGTAGATGATTGGAGGCAATGGCGTATGAATGACCAAGTTGGAGGATACACAAGGACTTATTCCAATCGGATGACATTTGCAACAGTGAAGGGTGGAGGTCACACTGCTCCTGAATACAAGCCTGAAGAATGCTTTGCCATGTACAGTAGGTGGATATCAAAGAGAGCTTTGTAG 2499 0.4054 MGRNSEHRKTSTFALYVGVGEGEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFRYEEYNGSLPNLVLRPHSWTKVSNIIFVDLPVFTGFTYARTESVAQRSDSSLAHQVHQFLRKWLVDHPKFLSNEAYIGGDSYSGIPIPAIVQEISQGNKEGLQPWINLQGYLLGNPVTTRTEKNYAIPFAHGMGLISDELYESLQKNCGGEYINVDTKNVLCSRDLNSYSEAISGLNTAHILDLKCEWLDNEISWRRSLIKKDQSKFLNTHLKLPPLNCRSYAYFLCAYWANDDNVRKALHIHKGSIGKWHRCNYNVPNKIDISSSFEYHVNLSKKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQISFQLVSCGNIVQFLPGFEGPLPFVLETGYVGVGEGEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKYEEYNGSLPNLVLRPHSWTKVSSIIFVDLPVFTGFTYARSESAQRSDSSLVHQVHQFLRKWLVDHPEFLSNEVYIGGDSYSGIPIPGIVQEISQGNEKGLQPWINLQGYLLGNAITTRKEKNYEIPFAHGMGLISDELYESLQKNCGGEYINVDTKNVLCSRDLNSYSEATSGLKSSHILDLRCEWLDNEISWRRYLIKKDQSKFLNTHLKLPPLNCRSYAYFLCAYWANDDNVRKALHIHKGSIGKWHRCTFDIPNKRDISSSFKYHVNLSKKGYRSLIYSGDHDLLVPFLATQAWIRSLNYSIVDDWRQWRMNDQVGGYTRTYSNRMTFATVKGGGHTAPEYKPEECFAMYSRWISKRAL* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2868 832 SUPERFAMILY alpha/beta-Hydrolases 399 829 IPR029058 -
Lja6g2868 832 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 387 831 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 Gene3D alpha/beta hydrolase 3 399 IPR029058 -
Lja6g2868 832 Gene3D alpha/beta hydrolase 408 832 IPR029058 -
Lja6g2868 832 Pfam Serine carboxypeptidase 12 389 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 Pfam Serine carboxypeptidase 403 828 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 387 831 - -
Lja6g2868 832 PRINTS Carboxypeptidase C serine protease (S10) family signature 531 556 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 PRINTS Carboxypeptidase C serine protease (S10) family signature 799 812 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 95 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 PRINTS Carboxypeptidase C serine protease (S10) family signature 96 106 IPR001563 GO:0004185|GO:0006508
Lja6g2868 832 SUPERFAMILY alpha/beta-Hydrolases 16 388 IPR029058 -
Lja6g2868 832 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 14 386 - -
Lja6g2868 832 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 386 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2868 Lja-Chr6 57812896 57847015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2868 674 832 Calmodulin-binding Proteins AT2G22960 59.748 8.92e-58 194