Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja6g2848 | ATGGCTTTCGGGCCATTGGATTGGTATTGTCGCCCTGTTGCGAATGGACTGTGGACAAGGACAGTTCAGAATGCCTTTGGTGCTTACACTCCTTGTGCAGTTGACTCTCTGGTGATCTCTGTTTCTCATTTGATTCTTCTTGGCCTATGCGTCTACCGTATATGGTTGATTAAGACGGATTTCAAAGCTAAGAGGTTATGTTTGAGGTCAAACCTCTACAATTATTTTCTGGGATTATTGGCTGCATACTGTGTGGCTGAGCCATTATACAGATTGATCATGGGGATATCAGTTCTGAATATTGATGGCCAGACTAGTCTTGCTCCATTTGAGATAGTTGCTCTGATTGTTGAGGCCCTTACTTGGTGCTCTATGTTGATTATGCTTTGGATTGAAACTAAAGTCTACATCAGTAAATTCCGATGGTTCGTCAGATTTGGATTGATTTATGCTATTGTAGGGGATGCTGTTATGGTCAATCTCGTCATTTTGGTGCAAGAGTTCTATAGCAGATCTGTGCTGTATTTGTACATCAGCGAGGTGGTCTGCCAGGTTTTGTTTGGAATACTTTTGCTTGTGTATGTTCCTACTTTGGATCCTTATCCAGGTTACACATCCATTGAGAGTGAAGTGGATACTGATGCTGAGTATGATGAACTCCCTGAAGGAGAGCTGATATTTCCTGAGAGGCAGGCCAACATATTTTCAAAAACACTTTTTTCTTGGATGAATCCCCTCATGCAACTTGGATACAAAAGACCGCTTACTGAAAGAGATATATGGAAATTAGATACGTGGGATACGACGGAGACACTGAACAATGGGTTCCAGAAATGTTGGGCTGAGGAGTCTCAGAAGTCGAAACCTTGGCTCTTAAGAGCATTAAATGCAAGCCTTGGAAGAAGGTTTTGGTTTGGAGGCCTTTGGAAGATTGGCAATGATGTTTCCCAATTTTCGGGCCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAGAAGGTGGTCCGGCTGGGATTGGTTATATATATGCCTTCTCAATATTTCTTGGAGTGGTCTTTGGGGTTTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTACAGGCTAAGATCAACGCTGGTAGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCATGAATCACGAAAGCAATTTGCATCTGGAAAAATAACCAACTTAATGACTACAGATTCTGAGGCACTTCAGCAAATATGCCAATCACTTCACACTTTATGGTCAGCTCCAGTTCGAATCGTTGTTGCTATGTTTCTTCTTTACCAAGAACTAGGTCCTGCTTCCCTTATTGGTGCTTTGATGCTAGTTCTTATGTTTCCACTACAGACTTTTGTTATCAGCAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCCATGGACACCGTAAAATGTTATGCATGGGAGAGTAGTTTCCAATCTAAAGTACTGAATGTCCGAAGTGATGAATTATCATGGTTTCGAAAAGCATCACTACTTGGAGCGTTAAATGGATTTATACTAAATAGCATTCCAGTTCTTGTAACTGTGGTTTCATTTGGAGTTTTCACGTTGCTTGGAGGGGATTTGACACCTGCAAGAGCTTTCACATCACTTTCTCTGTTTGCCGTGCTTCGATTCCCTCTCTTCATGCTTCCTAATACCATAACTCAGGTGGTTAATGCGAATGTGTCCTTGAAGCGTCTGGAGGATTTGCTTTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCTCTTGAGCCAAGCTTACCAGCTATCTCGATCAAGAATGGATACTTTTCTTGGGATGCAAAGGAAGTGCGACCTACATTGTCAAACATAAATTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGTAGCACTGGAGAAGGGAAGACATCACTCATATCTGCGATGCTTGGAGAACTTCCTCCAATTGCAGACTCAACTGTTGTAATGAGAGGAACAGTTGCTTATGTACCCCAAATTTCGTGGATTTTTAATGCAACTGTACGGGATAATGTTTTATTTGGTTCTGGCTTTGACCCAAGAAGATATGAAAAGGCAATAGATGTGACTGAACTGCTTCATGACCTTGAGTTACTGCCTGGTGGTGATCTTACTGAAATTGGCGAAAGAGGGGTAAACATCAGTGGTGGCCAGAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTTCATATTTGATGACCCCTTGAGTGCTCTCGATGCCCATGTGGCTAGACAGGTTTTTGATAAGTGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAACCAGCTACATTTCCTTTCTCAGGTTGACAGAATCGTTTTGGTCCATGATGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCAAACCAGGGACCATTGTTCCAAAAACTTATGGAAAATGCGGGTAAGATGGAGGAGTATGAAGAAGAAAAGGGAGATATTGAAACCACTGATCAGAAGTCCCCTTCAAAACCAGTGGTCAATGGCGAAGTTAATGATTCTACAAAGGGTGGGAGTAAACAAAAAGGAGGAAAATCTGTCCTTATCAAACAGGAAGAACGGGAAACAGGTGTTGTCAATTGGAACGTTCTAATGAGGTACAAAAATGCATTAGGAGGCTCTTGGGTGGTTCTTATACTCTTTGGATGCTATGTCTTAACAGAGGGGCTACGAGTATCAAGTAGCACGTGGTTAAGCCATTGGACTGATCAGAGTACTACTGAGGGTTATAATCCTGCCTTTTACAATCTGATATATGCGTCTCTATCATTTTGTCAGGTTTTGGTGACTCTAACAAATTCTTTCTGGCTAATCCTATCAAGTCTTTATGCTGCCAGAAGGTTGCATGAAGCCATGCTTAACTCTATATTACGAGCTCCGATGGTCTTCTTCCATACAAATCCACTCGGAAGGATCATCAACAGGTTTGCCAAGGATCTAGGCGATATCGATCGTAATGTTGCCCCGTTCATGAACATGTTTCTAGGTCAAGTTTTCATGCTTCTCTCAACATTCATCCTCATAGGTATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCATTGCTGGTACTGTTTTATGGAGCATATCTATACTATCAGAGCACAGCTCGTGAAGTGAAGCGATTAGATTCAATTAGCAGATCTCCTGTTTATGCACAATTTGGAGAAGCTCTGAACGGTTTGTCAACAATTCGCGCTTACAAAGCATACGATCGAATGGCGGAGATAAATGGGAGATCCATGGACAACAACATCCGATTCACGTTGGTGAACATAAGCGCAAACCGATGGCTCGCGATCCGGTTGGAAACCCTAGGAGGCCTCATGATATGGTTCACTGCGTCCTTCGCAGTGATGCAGAACGGTAGGGCAGAGAACCAGCAAGAATTAGCATCCACCATGGGGTTGCTTCTCAGTTACGCTTTGAATATCACCAGCTTGCTCACTGGTGTGCTCAGGCTTGCAAGTTTGGCTGAGAATAGTTTGAATTCTGTGGAACGTATTGGAACATACATAGATTTGCCTTCAGAGGCTCCTTCTGTCATTGAGGATAATCGCCCTCCCCCTGCGTGGCCTTCTTCGGGTGCCATCAAATTCAATGATGTTGTTCTTCGCTACAGGCCTGAGCTTCCTCCTGTGTTGCATGGCATCAGTTTCACGATTTTCCCGAGCGATAAGGTTGGCATTGTTGGGAGGACTGGCGCGGGAAAATCCAGCATGCTCAATGCACTGTTTCGGATAGTGGAATTGGAAAGAGGGAGAATACTGATTGATGATTGTGATATTGCAAAGTTCGGGTTGGCTGATTTGCGTAAAGTTCTGGGCATTATACCACAATCTCCAGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCATTTACTGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATTCGAAGAAATTCTTTGGGGCTGGATGCCGAGGTATCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTTGCCAGGGCTTTATTGCGGAGATCTAAGATATTAGTACTTGATGAGGCAACTGCAGCAGTTGATGTTAGAACAGATGCACTCATACAGAAAACAATCCGAGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGTGATCGGATTATTTTGCTTGATGGTGGCAAGGTTCTCGAGTATGATACCCCTGAGGTGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAGATGGTGCAGAGTACAGGAGCTGCAAATGCCCAATACTTGCGCAGCTTAGCACTTGGCGGGGACAAATCAGAAAGAGCAGAGAACACGCGTCTCGATGGTCAGAGAAAATGGATGGCTTCTTCCCGGTGGGCTGCTGCAGCCCAGTTTGCTCTTGCTGTTAGTCTCACGTCATCGCAGAATGACCTACAACGGTTGGAAGTAGAAGATGACAACAGTATTCTCAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAGAACAGCGACAAGTGTCCCCAGAAGGATGGTGGTCATCGCTTTACAAGATGATTGAAGGTCTTGCTATGATGAGTAGATTGGGCAGGAACAGGCTCCATGAACCAGACTACGGTTTTGAGAACCAATCAATCAACTTTGATCAAGTTGATATGTAG | 4860 | 0.4342 | MAFGPLDWYCRPVANGLWTRTVQNAFGAYTPCAVDSLVISVSHLILLGLCVYRIWLIKTDFKAKRLCLRSNLYNYFLGLLAAYCVAEPLYRLIMGISVLNIDGQTSLAPFEIVALIVEALTWCSMLIMLWIETKVYISKFRWFVRFGLIYAIVGDAVMVNLVILVQEFYSRSVLYLYISEVVCQVLFGILLLVYVPTLDPYPGYTSIESEVDTDAEYDELPEGELIFPERQANIFSKTLFSWMNPLMQLGYKRPLTERDIWKLDTWDTTETLNNGFQKCWAEESQKSKPWLLRALNASLGRRFWFGGLWKIGNDVSQFSGPLILNQLLQSMQEGGPAGIGYIYAFSIFLGVVFGVLCEAQYFQNVMRVGYRLRSTLVAAVFRKSLRLTHESRKQFASGKITNLMTTDSEALQQICQSLHTLWSAPVRIVVAMFLLYQELGPASLIGALMLVLMFPLQTFVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVLNVRSDELSWFRKASLLGALNGFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERILLPNPPLEPSLPAISIKNGYFSWDAKEVRPTLSNINLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPIADSTVVMRGTVAYVPQISWIFNATVRDNVLFGSGFDPRRYEKAIDVTELLHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIVLVHDGMVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEEKGDIETTDQKSPSKPVVNGEVNDSTKGGSKQKGGKSVLIKQEERETGVVNWNVLMRYKNALGGSWVVLILFGCYVLTEGLRVSSSTWLSHWTDQSTTEGYNPAFYNLIYASLSFCQVLVTLTNSFWLILSSLYAARRLHEAMLNSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAPFMNMFLGQVFMLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNISANRWLAIRLETLGGLMIWFTASFAVMQNGRAENQQELASTMGLLLSYALNITSLLTGVLRLASLAENSLNSVERIGTYIDLPSEAPSVIEDNRPPPAWPSSGAIKFNDVVLRYRPELPPVLHGISFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIILLDGGKVLEYDTPEVLLSNEGSAFSKMVQSTGAANAQYLRSLALGGDKSERAENTRLDGQRKWMASSRWAAAAQFALAVSLTSSQNDLQRLEVEDDNSILKKTKDALITLQGVLERKHDKEIEESLEQRQVSPEGWWSSLYKMIEGLAMMSRLGRNRLHEPDYGFENQSINFDQVDM* | 1620 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja6g2848 | 1619 | MobiDBLite | consensus disorder prediction | 844 | 887 | - | - | |
Lja6g2848 | 1619 | MobiDBLite | consensus disorder prediction | 858 | 880 | - | - | |
Lja6g2848 | 1619 | CDD | ABC_6TM_ABCC_D2 | 916 | 1212 | IPR044726 | GO:0140359 | |
Lja6g2848 | 1619 | CDD | ABCC_MRP_domain1 | 615 | 815 | - | - | |
Lja6g2848 | 1619 | SUPERFAMILY | ABC transporter transmembrane region | 914 | 1217 | IPR036640 | GO:0005524|GO:0016021 | |
Lja6g2848 | 1619 | CDD | ABCC_MRP_domain2 | 1235 | 1455 | - | - | |
Lja6g2848 | 1619 | Gene3D | ABC transporter type 1, transmembrane domain | 879 | 1218 | IPR036640 | GO:0005524|GO:0016021 | |
Lja6g2848 | 1619 | Gene3D | ABC transporter type 1, transmembrane domain | 277 | 601 | IPR036640 | GO:0005524|GO:0016021 | |
Lja6g2848 | 1619 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1237 | 1471 | IPR003439 | GO:0005524 | |
Lja6g2848 | 1619 | Pfam | ABC transporter | 633 | 768 | IPR003439 | GO:0005524 | |
Lja6g2848 | 1619 | SUPERFAMILY | ABC transporter transmembrane region | 289 | 595 | IPR036640 | GO:0005524|GO:0016021 | |
Lja6g2848 | 1619 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 610 | 838 | IPR027417 | - | |
Lja6g2848 | 1619 | Gene3D | - | 609 | 863 | IPR027417 | - | |
Lja6g2848 | 1619 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1226 | 1468 | IPR027417 | - | |
Lja6g2848 | 1619 | Pfam | ABC transporter transmembrane region | 305 | 571 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lja6g2848 | 1619 | Pfam | ABC transporter transmembrane region | 916 | 1161 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lja6g2848 | 1619 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 615 | 839 | IPR003439 | GO:0005524 | |
Lja6g2848 | 1619 | ProSitePatterns | ABC transporters family signature. | 741 | 755 | IPR017871 | GO:0005524 | |
Lja6g2848 | 1619 | CDD | ABC_6TM_ABCC_D1 | 305 | 591 | IPR044746 | GO:0140359 | |
Lja6g2848 | 1619 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 36 | 1514 | - | - | |
Lja6g2848 | 1619 | SMART | AAA_5 | 1263 | 1456 | IPR003593 | - | |
Lja6g2848 | 1619 | SMART | AAA_5 | 642 | 817 | IPR003593 | - | |
Lja6g2848 | 1619 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 917 | 1200 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lja6g2848 | 1619 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 304 | 583 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lja6g2848 | 1619 | Gene3D | - | 1220 | 1473 | IPR027417 | - | |
Lja6g2848 | 1619 | ProSitePatterns | ABC transporters family signature. | 1374 | 1388 | IPR017871 | GO:0005524 | |
Lja6g2848 | 1619 | Pfam | ABC transporter | 1254 | 1402 | IPR003439 | GO:0005524 | |
Lja6g2848 | 1619 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 1 | 36 | 1514 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja6g2848 | Lja-Chr6 | 57659644 | 57674307 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja6g2848 | 615 | 864 | Calmodulin-binding Proteins | AT2G36910 | 27.925 | 2.37e-25 | 112 |