Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2831 ATGGAACTTAGTTTGGTTTGGTCCATTGTAGAGGTTTTTTTAGGAAGTGTGAGTGTTTTGGTTTCTTGCACTATAGCACTAGCATTCCCTTTATTAAAAAGAATGAACATGTCCTACCTTGTATGCTTAGGATCACATTCATCTGGCCAAATTGCTGATGTTGAATCAGTAACCAACTCTCACTATGATTTCCTTGGACCTTACATGGGAAGCACAGAGAAGGCCAAAGAAGCAATATTGTACTCTTATGATGATAAATTTTTTAATGGCTTTGCTGCAGTATTTGATGAAAATGTAGCATCGAATATTGCAAAGCATCCGAATGTAATATCTGTAATCTTGAGCAAAAAACATACAATGCACACAACTCACTCATGGTTTTTCCTTGGGTTAGCGGGAAAAACCGGTGAAGTTCCAAAGGCCTCATTATGGCAGAAATCATTTGGTGAAGATATAATAATTGGAAGTATAGACTCAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGATGAGACCAATCCCAACCAAGTGGAAAGGAATATGTCAGACAGACAAAAACAATTCAGACAATTTTCACTGCAATAGAAAGCTAATTGGCGCAAGATACTTCTACCAAGAGTTTAAATCTTTTGGTGGCAAGGGTTCATTTGCAAGTGCTCGTGACTTTGATGGTCATGGCACACATACACTATCCACTGCTGGAGGTAACATTGTTCATGGAGCAAGTGTATTTGGCCTTGGCAAGGGAACAGCGAGCGGTGCATTACCAAAAGCTCGAGTGGCCTCTTATAAGGTGGGATGGCGATCAAAATATGGTCAACCAATCTCTTGTAATTCAGACATTTTGAGTGCTTATGAAAAGGCCATCAGTGATGGCGTTGATGTTATTTCAATGTCAATGGGTGATGAGATTCCCGAGGAGTTTATTTATAGTGCTACTTGCTTAGGGTCCTTCAAGGCGGTTGCTAATGGAATTATTGTTGTGAAGTCTGGAGGAAACAAAGGACCTTCTCCTAATACTGTAACCAACTTGGAACCGTGGGTAATCACGGTGGCTGCAAGCACAACAGACAGAGAGTTTTTTAGCTATATTACCCTTGGCAACAAGAAAGTCCTTCAGTATTCTCTTGATATAATTAATTCTTGTAGCATGTTATGCGAGGGTGGAGCTATTGATGAAAAAAAGGCAAAGGGAAAAATACTATTTTGCCTTTTAGGTGGTGATTTTTCGGTGTATGAGAAGGGTGTGGAAGCAGCGCGTGCAGGCGCGGTTGGATTGATTTTGGCTAGTGACGGGGATTTAGAAGTTGCTGAATGCCCTGATGATGTTCATGTGCTTCCTGCTTCACATGTCAACTCTAAAGATGCTAGTTACATTCTGAATTACATCAAGCACAACAGGTCGCCCAAGGCTCATATTTCAAGGGTGGAAACAAAACTGGGCATAAACCCCGCACCTTATGTTGCTTCATTTTCTTCAAGGGGCCCAAATCGTCTTGACCCAGCAATCCTTAAGCCTGACATCACTGCACCGGGAGTAAACATTATCGCTGCTTGTGCTGGTGCGTCTATGGGAACTCCTTTCATTAAAATGTCAGGCACCTCAATGGCAGCTCCTCATGTTGCCGGCATTGCTGGATTGCTTAAATCAATCCATCCTGATTGGAGTGTTGCTGCTATCAAGTCAGCACTAATGACCACAGCAAGTACAGAAGATAACTCTGGAGGGCCTATGTTGGAGTCAGATTATTCAGAATTGGAAGAGGCAACTCCATTTGCTTGTGGCGCAGGCCACATTCAACCTAATCGTGCTATGGACCCAGGTCTTGTGTATGATTTGGATGTTTGTGATAGTTTTTATCTAGAGATGTTCTACAAGGGACCGTATACTCCTTCAAAGTCATTCAAAATCGGAAATTTTAATTATCCGTCTATTGTGGTTCTTGACCTTGATCTTGGACGCTCTGTGACGGTTAGTCGTGTTTTTACGAATGTTGGGTCCCCCGGCGAGTATAGAGTGAAAATCAAGGCACATCCACAATTGCAAGTTGTAGTTAAGCCTCACATTTTGACCTTCAAGAAAAAAGGTCAAAAAAAGGAGTTTAAGGTAACATTTACCTGGAAGCCTAAGACGAAGGCGAAGGCGAAGGCGAAGGCAAAGACAAAGACTGAATATGTCTTTGGAAGGATACTTTGGAGTGACGGGGAGCACGATGTGAACACTCCTATCACGGTTAGATACCCCAAGTAG 2259 0.4219 MELSLVWSIVEVFLGSVSVLVSCTIALAFPLLKRMNMSYLVCLGSHSSGQIADVESVTNSHYDFLGPYMGSTEKAKEAILYSYDDKFFNGFAAVFDENVASNIAKHPNVISVILSKKHTMHTTHSWFFLGLAGKTGEVPKASLWQKSFGEDIIIGSIDSGVWPESKSFSDEGMRPIPTKWKGICQTDKNNSDNFHCNRKLIGARYFYQEFKSFGGKGSFASARDFDGHGTHTLSTAGGNIVHGASVFGLGKGTASGALPKARVASYKVGWRSKYGQPISCNSDILSAYEKAISDGVDVISMSMGDEIPEEFIYSATCLGSFKAVANGIIVVKSGGNKGPSPNTVTNLEPWVITVAASTTDREFFSYITLGNKKVLQYSLDIINSCSMLCEGGAIDEKKAKGKILFCLLGGDFSVYEKGVEAARAGAVGLILASDGDLEVAECPDDVHVLPASHVNSKDASYILNYIKHNRSPKAHISRVETKLGINPAPYVASFSSRGPNRLDPAILKPDITAPGVNIIAACAGASMGTPFIKMSGTSMAAPHVAGIAGLLKSIHPDWSVAAIKSALMTTASTEDNSGGPMLESDYSELEEATPFACGAGHIQPNRAMDPGLVYDLDVCDSFYLEMFYKGPYTPSKSFKIGNFNYPSIVVLDLDLGRSVTVSRVFTNVGSPGEYRVKIKAHPQLQVVVKPHILTFKKKGQKKEFKVTFTWKPKTKAKAKAKAKTKTEYVFGRILWSDGEHDVNTPITVRYPK* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2831 752 Gene3D - 360 483 - -
Lja6g2831 752 Gene3D - 624 750 - -
Lja6g2831 752 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Lja6g2831 752 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Lja6g2831 752 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Lja6g2831 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Lja6g2831 752 Pfam Peptidase inhibitor I9 38 117 IPR010259 -
Lja6g2831 752 SUPERFAMILY Subtilisin-like 121 612 IPR036852 GO:0004252|GO:0006508
Lja6g2831 752 Pfam PA domain 393 460 IPR003137 -
Lja6g2831 752 Gene3D Peptidase S8/S53 domain 151 618 IPR036852 GO:0004252|GO:0006508
Lja6g2831 752 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 37 748 - -
Lja6g2831 752 CDD Peptidases_S8_3 118 572 IPR034197 -
Lja6g2831 752 CDD PA_subtilisin_like 366 476 - -
Lja6g2831 752 Pfam Fibronectin type-III domain 642 748 IPR041469 -
Lja6g2831 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 121 IPR037045 -
Lja6g2831 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 748 IPR045051 -
Lja6g2831 752 Pfam Subtilase family 149 580 IPR000209 GO:0006508|GO:0008236
Lja6g2831 752 ProSiteProfiles Serine proteases, subtilase domain profile. 125 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2831 Lja-Chr6 57479542 57484000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2831 25 749 Subtilisin-like Serine Gene Family AT5G59810 45.490 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2831 - - vun:114175516 727.628