Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2829 ATGGGGAAACTCATAACCACTTCCAAACCTCTCATTCTCCAATCAAAACTCCTCTGTTTTTCTCTGCTCTACCTCTTCACCACACTCTTTCTTGCTCTCTACACCACTCTCTCACAATCCAAATGCCTCTTCAGATCATCCCCTTTAGATCCCCTCCAGAAATCACTTTTCTCTTACCCTTCTTCCTATGGAGAACACAAATATGCTGTCTCTACCACCCGTTCTACATGTTCTTCCCCTGTTTTCTTTTCAGATTACTGGGATGTTGTGAAGGAGATCAGCAATTTCAACAAGAATTCTCTATCTTCTTCAGGGGTTCTGAGATATATGCAGGGGAATGCTAATACATTTGGTGGGAATCTCAGCACCCTTGCGAGGTTTTCTTATTTTGATCATCAAAATGATACCACAGAAGTCCCCTGCGGATTTCTGAAGAAGTTTCCAATCAGTGGTTCTGATCGAATTGCCATGGAAAAGTGTGGCAATGTGGTTGTTGTTTCAGCAATCTTCAACGACCATGATAAAATCCGACAACCGAGGGGGCTTGGATCCAAAACACCAGAGGATTCATGTTTCTTCATGTTTGTAGATGATGTTACCCTAAAAGGTCTTGAACATCATGGATTGATTTCAATGAAATCTAGGGAATACAAGGTTGGTGTGTGGAGGATTGTGAAGGTTGTGAAAGAGGATTTGTATGAGAATCCAGCAATGAATGGTATCATACCAAAATATTTGGTTCACAGGCTATTTCCAAATTCCCAATTCAGCATTTGGATAGATGCGAAATTGCAATTGATCGTTGATCCATTGTTGTTGATTCATTCACTTGTTATATCTGAGGATGTGGACATGGCTATATCAAAACACCCTTTTTATGTTCACACCATGGAAGAAGCAATGGCAACTGCAAGGTGGAAGAAATGGTGGGATGTCAATGCCTTGAAGGTGCAAATGGAGACATACTGTGAGAATGGACTACAGCCATGGAGTCCCGACAAGCAGCCCTACGCATCAGATGTACCGGACAGTGCTTTGATCTTGAGGAGGCATGGATTGGGAAGTAACCTCTTCTCCTGTCTCATGTTCAATGAGATGGAGGCATTTAACCCAAGAGACCAATTGCCCTTTGCATTTGTTAGAGATCATATGAAGCCAAAACTGAAGCTGAACATGTTTGAGGTGGAAGTTTTTGAACAAGTGACAGTGGAGTACAGACACAATCTCAAGAGCAGTGTCAAGAAAGTGAGTAGTTCAGGAAGAAGGACCAAAAGGGCTGTCCCAGATTTGTTGTTTGTGAATAACAGGTGCCAGAAGTATCTATCCACAGTGTGGGGAGAGTCCAATGATTGA 1353 0.4228 MGKLITTSKPLILQSKLLCFSLLYLFTTLFLALYTTLSQSKCLFRSSPLDPLQKSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVKEISNFNKNSLSSSGVLRYMQGNANTFGGNLSTLARFSYFDHQNDTTEVPCGFLKKFPISGSDRIAMEKCGNVVVVSAIFNDHDKIRQPRGLGSKTPEDSCFFMFVDDVTLKGLEHHGLISMKSREYKVGVWRIVKVVKEDLYENPAMNGIIPKYLVHRLFPNSQFSIWIDAKLQLIVDPLLLIHSLVISEDVDMAISKHPFYVHTMEEAMATARWKKWWDVNALKVQMETYCENGLQPWSPDKQPYASDVPDSALILRRHGLGSNLFSCLMFNEMEAFNPRDQLPFAFVRDHMKPKLKLNMFEVEVFEQVTVEYRHNLKSSVKKVSSSGRRTKRAVPDLLFVNNRCQKYLSTVWGESND* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2829 450 PANTHER OS01G0210400 PROTEIN 1 447 - -
Lja6g2829 450 Pfam Protein of unknown function (DUF616) 112 407 IPR006852 -
Lja6g2829 450 PANTHER ALKALINE CERAMIDASE-RELATED 1 447 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2829 Lja-Chr6 57392833 57395648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2829 - - gmx:100809755 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2829 6 57392833 57395648 Lja6g2829 6 57392833 57395648 ECH
Lja6g2829 6 57392833 57395648 Lja4g0883 4 7385906 7392613 PCT