Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2826 ATGTCAATTTTCTGTACAAAAAACTTCTTCCAGAGATTCTGGGTAGACGAATTCGAAATGGGCAGTCATAGTCTTGCACATAGCAGCTTTTTGTCCAATGATCTCCTACCATCTCTTGGAGCCAGAATTAACCGGGAAATTGTACTAAGAAAATACATCACCTCCCCTTTCAACCCTCGGTATAGGGCTTGGGAGTTGTTACTGGTTGTTTTGGTCATATACTCTGCTTGGATTTGCCCGTTTGAGTTTGCCTTTCTGCCTTCCAAGCAGGGCACACTATTCATCATAGACAACATTGTCAATGGCTTCTTTGCCATTGACATTGTGCTGACATTCTTCGTCGCTTACCTTGACAGCCATTCTTATCTTCTGGTTGATGATCCAAAGAGAATTGCAATCAGGTACATATCTACCTGGTTTGCTTTTGATGTCTGCTCAACAGCACCATTTGAGTCCATTACCCTCCTCTTCACTGATCACAGCAGTGAGCTTGGCTTCAAAGTTCTTAACATGCTTCGATTATGGCGTCTGAGAAGAGTCAGTTCTCTATTTGCAAGACTTGAAAAGGACATTCGTTTCAATTATTTCTGGATTAGGTGCACAAAGCTCATTGCTGTAACATTGTTTGCAGTGCACTGTGCTGGATGCTTTAACTATCTAATTGCAGATAGGTACCCTGATTCTAAAAAAACATGGATTGGTGCTGTGTATCCAAATTTTAAAGAAGAAAGTCTTTGGGACAAATATGTCACTGCAATATACTGGTCCATTGTCACCCTCACTACCACTGGCTATGGTGATTTACATGCTGAGAACACCAGAGAAATGGTGTTTGATATCGCTTACATGCTGTTCAACTTGGGTTTAGGGGCATACATCATTGGAAACATGACTAACCTTGTAGTCCACTGGACCAGCCGCACCAGAGACTTTAGAGAAACAGTCAAGGCTGCTTCTGAATTTGCTTCAAGGAATCATTTGCCAAGTCGCATACAGGATCAAATGTTGGCACACATTTGCTTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACAATGAATGATCTGCCAAAAGCAATTCGTTCAAGCATTGCACACCATCTCTTTTTTCCTGTTGTTCAGAAGGTCTACCTCTTCCAAGGAGTCTCCCATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAGGCAGAGTATTTCCCACCCAAGGAAGTTGTGATACTGCAAAACGAGTCTCCTACCGACCTTTACGTGCTGGTTTCAGGGGCAGTGAATCTGGTTCGCCACATTGATGGGCATGATCAGGTCCTTGGGAAGGCAATTGCAGTAGATGCATTTGGAGAGATTGGAGTCTTGCATTGTATATCACAGCCTTTCACAGTCCAGACCACAGAGCTTTCTCAGATTTTAAGGCTCAACAAAAAATCCTTGAAGAATGTTTTACAAGCAAATCCAGGAGATGCACAAATTATAATGGATAACCTTTTAATGAGATTGAAGGGGCATGAAGAGCTTGGCTTTGAATATACACGTTCAAATCCTATTCTCCATGAACTGCTTCATGGAGGTAACATGCGAGCAAGCTCTTCACATGACTGTGCAAATAATTCAAATGGGCATGAAGGAGAGTGCATAAATGTCAGAGACTCAGACAACAGTCTGCATAAGGTGACTAATGATGCTCATTTAGTCAACAAGTGTAACATGATCCCTGAGAATGGCAAAAGAGATCCTCATGCTGCTGCGCACAAAGGGAATCTAGACGTTGTTGAAATTCTGCTTGAAAGAGATGCAAGTGCAAAGAACCCAGACCCCATAGGGTGGACACAAAAAGCAGTAGTCAAACAGCTAAAAAATAAAATCATTCCTCACCAAATACTGAGCTGTGAAAATGAGAATAAATCAGATGAATATAGAGTAGAGATTGTAGAGCCAGAAATCCTTAACCTTGGGGGGAATGACTCAGCCAGAAACTGTAGAAAAGATGGTATTAGACCTGTCAACTTCCCATTAAAGAAACTATGCACAAACTCCAGTTCAATAAATTCTAACAGTCTTAGTGATAGAGAAGCAGCAAGGTTCATCAAGAAGAGAGTAACAATCCATTTGCCTGGCAGATGCAGAAGTACCTCCCAGGGACAGCATGGGAAACTGATAATCCTACCTGATTCATTAGAAGAGTTGCTCAAAATTTCTGGTGAAAAAATTGGTGGCTTCAGCCCTACGAAAATAGTTAATGCAGAGAATGCAGAGATAGATGACATTAATGTGATTAGAGATGGTGATCATCTCTTTCTTCTTTGCAGCGACAGTGAAAATTTGAGTTGA 2328 0.4145 MSIFCTKNFFQRFWVDEFEMGSHSLAHSSFLSNDLLPSLGARINREIVLRKYITSPFNPRYRAWELLLVVLVIYSAWICPFEFAFLPSKQGTLFIIDNIVNGFFAIDIVLTFFVAYLDSHSYLLVDDPKRIAIRYISTWFAFDVCSTAPFESITLLFTDHSSELGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWIRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKKTWIGAVYPNFKEESLWDKYVTAIYWSIVTLTTTGYGDLHAENTREMVFDIAYMLFNLGLGAYIIGNMTNLVVHWTSRTRDFRETVKAASEFASRNHLPSRIQDQMLAHICLRFKTEGLKQQETMNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLVSEMEAEYFPPKEVVILQNESPTDLYVLVSGAVNLVRHIDGHDQVLGKAIAVDAFGEIGVLHCISQPFTVQTTELSQILRLNKKSLKNVLQANPGDAQIIMDNLLMRLKGHEELGFEYTRSNPILHELLHGGNMRASSSHDCANNSNGHEGECINVRDSDNSLHKVTNDAHLVNKCNMIPENGKRDPHAAAHKGNLDVVEILLERDASAKNPDPIGWTQKAVVKQLKNKIIPHQILSCENENKSDEYRVEIVEPEILNLGGNDSARNCRKDGIRPVNFPLKKLCTNSSSINSNSLSDREAARFIKKRVTIHLPGRCRSTSQGQHGKLIILPDSLEELLKISGEKIGGFSPTKIVNAENAEIDDINVIRDGDHLFLLCSDSENLS* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2826 775 Gene3D - 62 302 - -
Lja6g2826 775 Pfam Cyclic nucleotide-binding domain 398 483 IPR000595 -
Lja6g2826 775 SUPERFAMILY cAMP-binding domain-like 306 499 IPR018490 -
Lja6g2826 775 ProSiteProfiles Ankyrin repeat profile. 573 605 IPR002110 GO:0005515
Lja6g2826 775 Pfam KHA, dimerisation domain of potassium ion channel 697 766 IPR021789 -
Lja6g2826 775 Gene3D Helix hairpin bin 303 369 - -
Lja6g2826 775 ProSiteProfiles cAMP/cGMP binding motif profile. 379 498 IPR000595 -
Lja6g2826 775 PANTHER POTASSIUM CHANNEL AKT1 1 775 IPR045319 GO:0005249|GO:0006813
Lja6g2826 775 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 775 - -
Lja6g2826 775 SUPERFAMILY Voltage-gated potassium channels 56 302 - -
Lja6g2826 775 CDD CAP_ED 379 492 IPR000595 -
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 293 302 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 249 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 PRINTS EAG/ELK/ERG potassium channel family signature 275 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g2826 775 ProSiteProfiles KHA domain profile. 698 775 IPR021789 -
Lja6g2826 775 SMART cnmp_10 379 496 IPR000595 -
Lja6g2826 775 Pfam Ion transport protein 62 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lja6g2826 775 Gene3D Jelly Rolls 372 505 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2826 Lja-Chr6 57364864 57368574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2826 696 766 Ion Channels AT5G46240 56.338 6.09e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2826 K21867 - gmx:100811356 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2826 6 57364864 57368574 Lja6g2826 6 57364864 57368574 ECH