Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2822 ATGATCATGACCAATCTCACTTCTTCAACCACACCCACATCAACCTCCCTCTTCTCTTCTTTTTCTTCACTCTCCCTAACAGAGCTATTCCCATACCTCATATGCTTCATCCTCCTCCTCCTCCTCCTTGAACAACTCACATACCTCACCAAGAAACGCTTCATCCCAGGACCAAACCTCATCCTCCCCTTCATAGGCAACGCCATCCCATTAGTCAGAGACCCAACAAAATTCTGGGACCTTCAATCTTCCCTTGCAAAGTCCACACCCTTAGGCTTCTCTGCCAACTACATCATCGGCAACTTCATCATCTTCATCAGAGACACAGAGCTTTCCCACAAGGTCTTCTCCAATGTCAGACCCGGTGCCTTCCACCTCGTCGGCCACCCCTTCGGCAAGAAACTCTTCGGCGATCACAATCTCATCTACATGATGGGCCAGGATCACAAGAATCTCCGCCGTCGAATCGCTCCCAATTTCACCCCCAAAGCACTCTCCACCTACACCGCGCTGCAGCAAATCATCATCCTCAAACACCTCAAATCATGGGCCGCCGGAAAATCCAGCTCCGCCATCCCCCTCCGTGTCCTGGCCCGTGATATGAACCTTGAAACCTCGCAGACTGTGTTTGTGGGCCCTTACTTGGGCCCCAAGGCCCGAGAGAGGTTTGAGCATGATTACTACCTCTTCAACGTCGGCCTCATGAAGCTCCCCGTCGATCTCCCCGGAACCTCCTTCCGGAACGCCAGGCTCGCCGTCGACCGCCTCGCCGGAACACTAGCCACCTGCGCGAAGATGAGCAAGAGCAGGATGGAGAAAGGAGAAGAGCCTTCTTGCTTAATCGATTACTGGATGCAGGACACGCTAAGAGAAATCGAAGAAACTCGCCTCGCCGGAGAATCACCACCACCGTACTCCAGCGACGCTGAAATCGGTGGCTACCTCTTCGACTTCCTCTTTGCCGCACAGGATGCTTCCACCTCGTCGCTTTTATGGGCGGTGGCGCTGCTGGATGCTCACCCGGAGGTTCTCGCCAGGGTGAGAGAGGAGGTCGCCGGAATCTGGTCGCCGGAGTCGGATGAACTGATAACATCAGAGAATCTCAGGGAGATGAAGTACACGCAGGCGGTGGCGCGTGAGGTGGTGAGATACCGGCCTCCGGCGACGATGGTTCCTCACATCGCGGCCGAGAGTTTCCCACTGACGGAGTCGTACTCGGTTCCGAAGGGGGCAATTGTGTTCCCGTCGGCGTTTGAGTCGTCGTTTCAAGGGTTCACTAAACCAGACCGGTTCGACCCAGACCGGTTTTCCGATGAGAGAAAAGAGGACCAAATATTTAAAAGGAACTTTCTAGCATTTGGGGCTGGGCCCCACCAGTGTGTGGGTCAGAGGTACGCTTTGAATCATCTTGTTTTGTTCATCGCAATGTTCATTTCGTTGATTGATTTCAAGAGGGATAGAACGGACTACTGTGATGAGATCATGTATGTGCCCACGATTTGCCCCAAAGACGATTGCACGGTTTTTATGTGTAAGCGGTGCGTACGGTACCCTTCTTTCCCTGCCGTGGAGGAGCTCGTGAAATGA 1587 0.535 MIMTNLTSSTTPTSTSLFSSFSSLSLTELFPYLICFILLLLLLEQLTYLTKKRFIPGPNLILPFIGNAIPLVRDPTKFWDLQSSLAKSTPLGFSANYIIGNFIIFIRDTELSHKVFSNVRPGAFHLVGHPFGKKLFGDHNLIYMMGQDHKNLRRRIAPNFTPKALSTYTALQQIIILKHLKSWAAGKSSSAIPLRVLARDMNLETSQTVFVGPYLGPKARERFEHDYYLFNVGLMKLPVDLPGTSFRNARLAVDRLAGTLATCAKMSKSRMEKGEEPSCLIDYWMQDTLREIEETRLAGESPPPYSSDAEIGGYLFDFLFAAQDASTSSLLWAVALLDAHPEVLARVREEVAGIWSPESDELITSENLREMKYTQAVAREVVRYRPPATMVPHIAAESFPLTESYSVPKGAIVFPSAFESSFQGFTKPDRFDPDRFSDERKEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFISLIDFKRDRTDYCDEIMYVPTICPKDDCTVFMCKRCVRYPSFPAVEELVK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2822 528 Pfam Cytochrome P450 56 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lja6g2822 528 SUPERFAMILY Cytochrome P450 51 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PANTHER CYTOCHROME P450 26 31 514 - -
Lja6g2822 528 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 Gene3D Cytochrome P450 45 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2822 528 PANTHER BNAA05G09340D PROTEIN 31 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2822 Lja-Chr6 57320062 57322097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2822 21 520 Cytochrome P450 AT2G34500 68.588 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2822 K09832 - gmx:100808148 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2822 6 57320062 57322097 Lja6g2822 6 57320062 57322097 ECH