Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2819 ATGGGTGTCAATTCTTCTCCTATGAGCGAGGAGGAAGGTACGAACAGAGGAATAGCCACCGATCACCATTACTATGGAACCTTTCAAGGCGTTGCTAATTACTACCCTTCTCCTCCTCCTCCAAATCCAAACTCTCCCGCTTCCAACGGTGGCGCCTACGCTTATTACCAAGGACAAGGACAAGGGTACCACGCTCTTCCAGTTTATGCTGTTGCGGAAGGAAGGCCTGTAAGAGAACGTCGTCTTTGTTGCTGTGGACTTGGTCTCGGTTGGTTCTTGTTTATAACTGGTTTTTTTCTTGGTGGCGGTCCCTGGTACATTGGAGCTTTCTTGCTACTATGTGTGCAGATGGATTACCGAGAAAAGCCTGGATTAATTGCATGCGCAGTTGGTTCCCTCGTTGCTGTGATAGCTGTTACTCTTGGTGTTGCACATCCACATCTGGCAAAGTTGACATGA 459 0.4815 MGVNSSPMSEEEGTNRGIATDHHYYGTFQGVANYYPSPPPPNPNSPASNGGAYAYYQGQGQGYHALPVYAVAEGRPVRERRLCCCGLGLGWFLFITGFFLGGGPWYIGAFLLLCVQMDYREKPGLIACAVGSLVAVIAVTLGVAHPHLAKLT* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2819 152 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 8 145 IPR044804 -
Lja6g2819 152 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 8 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2819 Lja-Chr6 57305661 57309879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2819 8 144 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.518 7.74e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2819 - - gmx:102662831 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2819 6 57305661 57309879 Lja6g2819 6 57305661 57309879 ECH