Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2813 ATGGAATGCAATAAAGAAGAGGTCTTAAGAGCCAAAGTAATTGCTGAAAAGAAGATGGAAAGCAAGGATTTCGCAGGTGCTCGAAGAATTGCCCTTAAGGCTCAGCACCTATATCCTGATTTGAAGAATATCACTCAAATGCTTGTTGTTTGTGATGTGCATTGCTCAGCTGAGCAGAAATTGTGTGGTGGCTTGATAGACTGGTATAAAATACTTCAAGTTGAGGCGACAGCCGATGATGCAACAATTAAGAAGCAATACAGGAAACTTGCTCTTCAGCTTCATCCTGACAAGAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAACAGTGCTTTTGGATAGAGGTAAACGATCTTCGTTCCACAGGAATCAAATGAACAGAAATGCAATGCAGTATCATCAGCGGCAAAAAAAGTCTTGGCCACCATCTCAGCAAACCAGTGACCGGCCCAATTTCACAAACTTGAATCCTCCTCCACAGCAACAACCATCTAGGCCACCGTCTCAGCAGGGGGTTAATGGCGGCCGACCGACTTTTGGTACCGTTTGCTGCTTCTGTTTGCATAGAAATCAGTATTCCAGGGAAGTTTCAATAAACCTCTTCACTGTCAACTTTGCAATAAGCCCTTCATGGCATTTGAGGTGA 666 0.4384 MECNKEEVLRAKVIAEKKMESKDFAGARRIALKAQHLYPDLKNITQMLVVCDVHCSAEQKLCGGLIDWYKILQVEATADDATIKKQYRKLALQLHPDKNKFAGAEAAFKLIGEAQTVLLDRGKRSSFHRNQMNRNAMQYHQRQKKSWPPSQQTSDRPNFTNLNPPPQQQPSRPPSQQGVNGGRPTFGTVCCFCLHRNQYSREVSINLFTVNFAISPSWHLR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2813 221 MobiDBLite consensus disorder prediction 137 162 - -
Lja6g2813 221 PANTHER - 1 203 - -
Lja6g2813 221 Gene3D DnaJ domain 66 171 IPR036869 -
Lja6g2813 221 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lja6g2813 221 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 203 - -
Lja6g2813 221 Pfam DnaJ domain 67 127 IPR001623 -
Lja6g2813 221 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lja6g2813 221 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lja6g2813 221 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lja6g2813 221 MobiDBLite consensus disorder prediction 137 181 - -
Lja6g2813 221 CDD DnaJ 67 120 IPR001623 -
Lja6g2813 221 SMART dnaj_3 66 123 IPR001623 -
Lja6g2813 221 SUPERFAMILY Chaperone J-domain 64 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2813 Lja-Chr6 57247051 57247716 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2813 4 127 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.411 5.07e-24 96.3