Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2804 ATGGAATGCAATAAAGAAGAGGCCTTAAGGGCCAAGGTCATCGCTGAAAAGAAGATGGAAAGCAAGGATTTCACAGGGGCACGTAAAATTGCCCTTAAGGCTCAGCAACTATATCCTGATCTGGAGAATATCGCTCAAATGCTTGTTGTTTGTGATGTGCATTGCTCTGCTGAGCAGAAATTTTCTGGTGCTGCGAGGGACTGGTATAAAATACTTCAGGTTGAGGTGACAGCTGATGATGCAACAATTAAGAAGCAATACAGGAAATTTGCTCTCCAGCTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAACAGTGCTTTTGGATAGAGAAAAACGAACTGTGTTCGACAGGAATGTGCACAGGTTTCCAATGTATAGAAATGCTATGCCATCTCATCATCAGCAGCAGGGTCAGAGAAATTTTAATCCTGTAATGCAAACGAGTGTCAGGCCGGTTTTCACAAACTTGAATCCTCCGCAGCAACAACCGTCCAGGCCCCCATCTCAGCCAGGGCCAGGGGTTAATGGTGGCCGATCTACTTTTTGGACTGTTTGCTCCTTTTGTTCCCATAGATATGAGTATTACAAGGAAGTCTTAAATAGATCTCTTCGCTGTCAACATTGCAATAAGCCCTTCATTGCATATGAGGTGAATATCCAAAGTACAACTCCAACAACTAATTCAAGTCAGCAAGCTTTTGGCCAGCAGAACTATGGTCAGAATCAGGGTGCGTTTAAGGCTGGTGTTGGATCTCCAGTTAATTTGCATGCTCAACGATCCAATGCGGAATATTATCAGAAAAAAGCCACTACTTCTAATGCCTCTGTAAAGCCAAATGGAAAGAGAAGGAGGAAGCAGGCAGCAGAATCCAGTGAAGATTCTATAGGCAGCACTGACTCTGATGATGAAGATGATATACTTAATGGCAATGATGGTTTTCCTGATACTTCTTCTTATCGAGAAGAGCAACGACGTAGATCTACCCGGCAAAAACATCAGGTTTCCTACAAGGAGAATAGGAGTGATGACGACGATGAGGAGTCCTTTCACGCTTCAAAACGGGGTAAGGGGAGTGCATCACCATGTGCTAGTGGTGAAACTAGTGGGGAGGCAGCTAAATTGAACAATCAAAATGGCTTGGCTGCTGATCTGAAAGATGATCAGAAAGGAGTAAAGCAGAAGCAAAATAATTATGCTGAGGATAACTTAGAAAATACAAATGTGGAGACCAAAGGGAGAGGAAAAGATGCACCGGGCAGCTCAAAGATAGATGTAGCTTCTGAACGTTTAACCTCAAAATCCACAAACGGTCCAGATGTTTTTGTTTACCCTGATCCAGAGTTCAGTGACTTTGACAAGGACAAGAAAGAGGAGTGTTTTGCTGCTGGGCAGATCTGGGCCATTTATGATGATATAGATGGCATGCCTAGATTCTATGCTACAATCCGTAAAGTTTTCCCCCCTGGATTTAAGCTGGAGATAACATGGTTTGAGCCAGATCCGGATGATGATGATGAAGTCAAATGGTCAACTGAGCAACTGCCAATTTCTTGTGGGAAATATAAACTTGGTAGCACTGAAACTACTGAAGATCATCTGATGTTCTCCCATCTAGTCTTATGCCAAAAGATCGGGCGCTCTATTTTTAAAGTGTATCCGAGAAAGGGAGAAACCTGGGCTCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGTGGAGTCTCATCGACAGTATGATATGGAGATTGTTGAGATCTTGTCAGATTATATTGAAGGTGTGGGAGTAGTTGTTTCATACTTGGCTAAGTTGAAAGGTTTCGTGAGTCTCTTCTGTCCAACTATGAAGGGGGCTAATCACACATTTCAAATTCCATCAGTTGATTTATTCAGATTCTCTCACAGGATTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCAGGTGTCCCTGTAGGATCTTATGAACTTGATCCTGTATCTTTGCCGACGAACCTGGAGGAGATTGATGTTCCTAAAGATTTTGAAGTGAAGGTTGGCCATACTCCATCTGTTGGGAGGAGCACAAGATCTTCAAATATGATGAAGGGAGATGCATCCACTGACAAGGTTAAACTGGATAAAAGCGATTCAGCAGAGGTGACAAAGGATCATGTTTTTCGTACTAATGATGGCAGTCCATCTGTTGGGAGGAGCACAAGATCTTCAAATATGATGAAGGGAGACACATCCACTGACAAGGTTAAACTGGACAGAAGAGATTCAGCAGAGGTGAGAAAGGATCCTGTTTTTCGTATTAATGATGGTAGTCCATCTGTTGGGATGAACTCAAGATCATCAAATATGTCGAAGGGAGACACATCCACTGGCAAGGTTAAACTGGACAGAAGCGATTCAGCAGAGGTGACCGAGGATCCGGTTTTTCGTATTAATGCTGGTAGTGGACCTTTGGCTTCAGTCCCGGTCCCAGGAACTATTGAAATTCCAGATCCTGTGTTCTTTAATTTTGATAAGGAAAGGTCCCTTGGAAGGTTTCGGATTGGTCAGATTTGGGCATTTTATAGCGATGAGGATGGCCTGCCAAAATACTATGGTCTGATTAAAAAGTTAAGGACTGGCCCGGATCTAGAGTTGCAAGTTACTTTTCTTACTAACTGCTGGCTGCCAGAGAAAGCTATTAGATGGGAAGATAATAAGATGCTCATTTCCTGTGGAAGATTCAAAATCAAAGCTGGTGCTCGTCCCTGTCTGTATTCTGACCTTAATTCTGTTTCACATCTGGTGCTTGCTAGTACTGAAGGTACCAATAAGGAATATGAAATTTTTCCAAAGAGAGGTGAAATTTGGGCACTGTATAGGAAATGGACAGCTAAAATAAAACCTTCTGACTTGCAAACGTGGGAGTATGACATAGTGCAAATTCTTGACGTTAATGATTTACGGATAGCTGTTGTACATTTGGAGTTGGTAAAAGGTTTCCCTTCAGTTTTTAAAGTCCAGAAAAATGGAGGATCAGCTGTGACCATGAAGATCCCCAAGGCAGAGTTGCTGAGGTTCTCCCACCAAATCCCCGCAATCAAACTGACAGAAAAACATGGCTCTGTGAAAGGTTGCTGTGAGCTTGATCCAGGAGCACTACCAATGCATTATTTTAGCCAAAAGTGA 3198 0.4256 MECNKEEALRAKVIAEKKMESKDFTGARKIALKAQQLYPDLENIAQMLVVCDVHCSAEQKFSGAARDWYKILQVEVTADDATIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQTVLLDREKRTVFDRNVHRFPMYRNAMPSHHQQQGQRNFNPVMQTSVRPVFTNLNPPQQQPSRPPSQPGPGVNGGRSTFWTVCSFCSHRYEYYKEVLNRSLRCQHCNKPFIAYEVNIQSTTPTTNSSQQAFGQQNYGQNQGAFKAGVGSPVNLHAQRSNAEYYQKKATTSNASVKPNGKRRRKQAAESSEDSIGSTDSDDEDDILNGNDGFPDTSSYREEQRRRSTRQKHQVSYKENRSDDDDEESFHASKRGKGSASPCASGETSGEAAKLNNQNGLAADLKDDQKGVKQKQNNYAEDNLENTNVETKGRGKDAPGSSKIDVASERLTSKSTNGPDVFVYPDPEFSDFDKDKKEECFAAGQIWAIYDDIDGMPRFYATIRKVFPPGFKLEITWFEPDPDDDDEVKWSTEQLPISCGKYKLGSTETTEDHLMFSHLVLCQKIGRSIFKVYPRKGETWALFKNWDIKWYMDVESHRQYDMEIVEILSDYIEGVGVVVSYLAKLKGFVSLFCPTMKGANHTFQIPSVDLFRFSHRIPSFKMTGQERAGVPVGSYELDPVSLPTNLEEIDVPKDFEVKVGHTPSVGRSTRSSNMMKGDASTDKVKLDKSDSAEVTKDHVFRTNDGSPSVGRSTRSSNMMKGDTSTDKVKLDRRDSAEVRKDPVFRINDGSPSVGMNSRSSNMSKGDTSTGKVKLDRSDSAEVTEDPVFRINAGSGPLASVPVPGTIEIPDPVFFNFDKERSLGRFRIGQIWAFYSDEDGLPKYYGLIKKLRTGPDLELQVTFLTNCWLPEKAIRWEDNKMLISCGRFKIKAGARPCLYSDLNSVSHLVLASTEGTNKEYEIFPKRGEIWALYRKWTAKIKPSDLQTWEYDIVQILDVNDLRIAVVHLELVKGFPSVFKVQKNGGSAVTMKIPKAELLRFSHQIPAIKLTEKHGSVKGCCELDPGALPMHYFSQK* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2804 1065 MobiDBLite consensus disorder prediction 276 434 - -
Lja6g2804 1065 Pfam Domain of unknown function (DUF3444) 452 657 IPR024593 -
Lja6g2804 1065 Pfam Domain of unknown function (DUF3444) 836 1042 IPR024593 -
Lja6g2804 1065 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 755 775 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 690 809 - -
Lja6g2804 1065 Pfam DnaJ domain 67 128 IPR001623 -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 711 731 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 307 321 - -
Lja6g2804 1065 Gene3D DnaJ domain 64 175 IPR036869 -
Lja6g2804 1065 SMART dnaj_3 66 123 IPR001623 -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 165 187 - -
Lja6g2804 1065 CDD DnaJ 67 120 IPR001623 -
Lja6g2804 1065 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 782 1063 - -
Lja6g2804 1065 PANTHER - 782 1063 - -
Lja6g2804 1065 PANTHER - 1 733 - -
Lja6g2804 1065 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 733 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 781 799 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 373 387 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 732 754 - -
Lja6g2804 1065 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lja6g2804 1065 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lja6g2804 1065 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 329 365 - -
Lja6g2804 1065 MobiDBLite consensus disorder prediction 695 709 - -
Lja6g2804 1065 SUPERFAMILY Chaperone J-domain 64 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2804 Lja-Chr6 57098532 57103508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2804 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 8.07e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2804 - - cam:101500991 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2804 6 57098532 57103508 Lja6g2804 6 57098532 57103508 ECH
Lja4g1232 4 10912676 10916163 Lja6g2804 6 57098532 57103508 PCT