Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2790 ATGAAGTATTTGGGATATGTTCCTGCATTGACCCCGGATGAGGTCAAGGAGCAGGTGGAGAAAGTGCGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAGTTTTTGCGTATACTTTTGAAATATATAATAAAACATCAAGCACTTATATGCGAAATATCTTCTCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACGTGCGAGAAGATCAATTGGCTACTGTCAGAGGGTGAGCAGTGGCTAAAGCCTGAGTACCGATCCTCAGGAAGATCAATGATTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTCGGTGTTATTGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAATATTTTTAACCCTATGCTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCCGTAGGAGCTCCGGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACTGGAGAAGCACTGGTGTCTTCTGCTGACAAGGTCATTTTTGTAGGATCACCTGGGGTTGGTAAAGTGATAATGAGAAATGCCGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGACGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGCGCTGGTGCTGAACGATTTTATGTCCACAAGAACATTTATTCATCTTTCATCAGCAAAGTTACCAAAATCTTTAAATCTGTTACAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCACGAGCATTCTGAAAAACTTGAAGGCCTAATAAATGACGCGCTAGAGAAAGGAGCTGAAATTGTTGCGCGTGGAAGTTTTGGACATATAGGAGAAGATGCAGTTTATCAATATTTTCCTCCTACTATGATTGTAAATGTGAATCACTCGATGAGATTGATGCAGGAAGAGGCATTTGGACCAATCATGCCGATAATGAAATTTAGCTCTGATGAAGAGGCTATCAAGCTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAGTCAAAGCCGTGCCAGAGAGATAACTTCCCAGATACATTGTGGGGTTGCTGCAGTTAATGATTTTGCATCATCGTACATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAACACAGTGGATTTGGACGATTCGGCGGTGTAGAAGGTTTACGGGCATGTTGCCTTGTAAAATCAGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCAAGATACCTAAGCCAATTCAGTATCCTGTAGCAGAAAATGGATTTGAGTTTCAGGAGTCACTTGTTGAAGCATTGTATGGGCTTAGCATATGGGACCGTTTGCAAGCATTGGTCACCGTTTTGAAAATGCTTACTGAGAAGAACTCCACCAATAGCAGCAAGAAGGAGAAATGA 1569 0.4302 MKYLGYVPALTPDEVKEQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMIHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAVGAPEDLVEVITGFAETGEALVSSADKVIFVGSPGVGKVIMRNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHKNIYSSFISKVTKIFKSVTAGPPLAGKYDMGALCMHEHSEKLEGLINDALEKGAEIVARGSFGHIGEDAVYQYFPPTMIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAIKLANDSKYGLGCAVFSGSQSRAREITSQIHCGVAAVNDFASSYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVTVLKMLTEKNSTNSSKKEK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2790 522 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 224 231 IPR029510 GO:0016491
Lja6g2790 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 427 IPR016163 GO:0016620
Lja6g2790 522 Pfam Aldehyde dehydrogenase family 3 454 IPR015590 GO:0016491
Lja6g2790 522 SUPERFAMILY ALDH-like 3 456 IPR016161 GO:0016491
Lja6g2790 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 452 IPR016162 GO:0016491
Lja6g2790 522 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 252 263 IPR016160 GO:0016491
Lja6g2790 522 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 489 - -
Lja6g2790 522 CDD ALDH_F15-22 1 458 - -
Lja6g2790 522 PIRSF ALDH 7 493 IPR012394 GO:0006081
Lja6g2790 522 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2790 Lja-Chr6 56992429 56997913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2790 1 522 Aldehyde Dehydrogenase Gene Family AT3G66658 80.268 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2790 - - gmx:100802990 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2790 6 56992429 56997913 Lja6g2790 6 56992429 56997913 ECH