Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2757 ATGATGTCCATTTTCAACAAAGGTGAAGGAGTTGAGGTAATCAAGCAAAACGAAAATGACGAATACAGCTACTTTCCGGCCACCGTGCTCCGGCCACCGTCGAAAAACAACAACATGGTGTTCGTGGAGTACCAGGCTCCCACAAAGTCACGCAATAGAGAGTATGTGAATGTTGCTAGCGTGAGACCCAAGCTTCCATACGAGCTCAATCCATGGTTCAAGGTCGGTGACTCCGTCGACGCTTTCCGGCCGAATGTCACTGCATTTTCTTGGTGCCCTGCCACCGTCTCCGACATCCTCGAAAACTCCACCTACCGTGTCGACTTCCGTGGTCATTCCGCCGCCGTCGACCACTGTAGTCTCCGCCTTCACCGGGATTGGGTAAATGGGAACTGGGTCCCACCTCTCCCTCAACCTCAACCGCAGGAGCAGCCACCAGAAACGGTGACAAGGTCTGAAAAAATAAGGATCAAGATCAAATGCAGCAGAAGCCCACAAAAAGAATCAGAGTTTTTTAAAGGGAAAATAGTGGAAGTCAGCAGCGATGATGAAGGTTATAAGGGTGCTTGGTTCGTTGCTACTATTGTTGACATAATAGCAAAAGACAAGTTTCTAGTAGAATATAGGGACCTGGCAACCGAAGATGGCACCCAGCTCTTGAATGAAGTAATCCATGAGAGGTTTATTAGGCCCTGCCCCCCTGAAGTTCCACTTGCTGGTTCTTTTAAACAGTTCCAAGAGGTTGATGCATGGTACAATGATGGGTGGTGGGAAGGAGTGGTGTGTGAAGTACGTAATGGCAGAGAGTGCCTTGTTTCTTTTATGAACAATGATGTAATGGAATTTGAAAATTCTAAACTAAGGCCTCATCAGGACTGGTTGGATGGAAAATGGGTCATGTCTTCCAAGGAGTCAAGTGAGTTGGTGAAGAAGTTTGGAGATGTGAGGCCTGAGGCCAATAATCTCACTGGAAATAAATTAATTGTGAAACTTAAAAAGTCAAGTGACCCGGCAAAGAGGCCCAGGGATGTAATGGAAAGAACCCCGATCACCAGAAGCAAACATATGTTACAATTTTGCAGAGGTGCAAAGGTAGAAGTTAGAAGCGATGAAGAAGGATACCAAGGTTCCTGGTATACTGCCATTATTGTTGACCCTTTGCAGAGCAGCAAGTACTTGGTGGAATATTCAACCCTTAAAACAGATGACTTGACTGAACAACTGAAAGAAGTAGCAGAAGCTTTTAATATCAGGCCATGTCCACCAGATACTAGTGGTGCTGATTGCTTTTTGCTGCATGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGTCAGGTATCCCGTGTTCTTGGAGGCTTCAAGTATATGGTTTACTTCTGGACTTCAAAGGAGGAGCTGGAATTCGAATACAGTCTTCTAAGGCCTCATCAGGACTGGATTGATGGAAAATGGGTGCTTGCTTCTTTGGTATGA 1482 0.4582 MMSIFNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQAPTKSRNREYVNVASVRPKLPYELNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAVDHCSLRLHRDWVNGNWVPPLPQPQPQEQPPETVTRSEKIRIKIKCSRSPQKESEFFKGKIVEVSSDDEGYKGAWFVATIVDIIAKDKFLVEYRDLATEDGTQLLNEVIHERFIRPCPPEVPLAGSFKQFQEVDAWYNDGWWEGVVCEVRNGRECLVSFMNNDVMEFENSKLRPHQDWLDGKWVMSSKESSELVKKFGDVRPEANNLTGNKLIVKLKKSSDPAKRPRDVMERTPITRSKHMLQFCRGAKVEVRSDEEGYQGSWYTAIIVDPLQSSKYLVEYSTLKTDDLTEQLKEVAEAFNIRPCPPDTSGADCFLLHEWVDAWYNDGWWVGQVSRVLGGFKYMVYFWTSKEELEFEYSLLRPHQDWIDGKWVLASLV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2757 493 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 91 493 - -
Lja6g2757 493 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 4 133 - -
Lja6g2757 493 Pfam Agenet domain 362 422 IPR008395 -
Lja6g2757 493 Pfam Agenet domain 8 66 IPR008395 -
Lja6g2757 493 Pfam Agenet domain 174 234 IPR008395 -
Lja6g2757 493 SMART agenet_At_2 3 69 IPR014002 -
Lja6g2757 493 SMART agenet_At_2 428 484 IPR014002 -
Lja6g2757 493 SMART agenet_At_2 240 295 IPR014002 -
Lja6g2757 493 SMART agenet_At_2 71 129 IPR014002 -
Lja6g2757 493 SMART agenet_At_2 169 237 IPR014002 -
Lja6g2757 493 SMART agenet_At_2 357 425 IPR014002 -
Lja6g2757 493 Gene3D - 157 242 - -
Lja6g2757 493 Gene3D - 347 428 - -
Lja6g2757 493 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 91 493 - -
Lja6g2757 493 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2757 Lja-Chr6 56700191 56703149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2757 350 493 PHD Transcription Factor Family AT5G58610 25.581 7.56e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2757 - - adu:107483399 543.117