Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2740 ATGGAAGAGACATTTGTTCCATTTCGTGGAATAAAAAATGATCTTCAGCAGAGGTTGATGTATTACAAGCAAGACTGGATTGGTGGTCTCACTGCAGGTTTCAGGATATTAGCCCCTACCACGTATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTTGGAGAACAATTGGAAAGAGATACAGGTGGAATACTCACTGCAGTGCAAACATTAGCATCTACTGCTGTGTGTGGAATTATACACTCAATTATTGGAGGCCAGCCTTTGCTGATTCTTGGGGTGGCAGAACCAACCGTAATTATGTACACGTTCATGTTCAACTTCGCAAAAAATAGACCGGATTTGGGTTCAAAGCTTTTTCTAGCATGGACTGCATGGGTATGCATTTGGACTGCCATCTTGCTGTTCCTACTTGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCACACGCATAGCAGGGGAATTGTTCGGCCTTCTTATCGCAATGCTCTTCATGCAAGAGGCTATTAGAGGACTCATCCACGAGTTTCGCATACCTGAGAGATCAGACCTAACATTACCTGAGTTTGAATCTTCATGGAGATTTGGAAATGGAATGTTTGCTTTAATTCTGTCCTTTGGCCTTCTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGATATGGATCAGGATGTCTGCGAGGCTTCATAGCAGACTATGGTGTCCCATTGATGGTTCTAATATGGACTGCTGTTTCTTATATACCTGCGGGGAGTACGCCAAACGGAATCCCTAGGCGCCTCTTCAGTCCAAATCCATGGTCTCCTGGTGCATATGAAAACTGGACTGTCATAAAGGACATGCTGAATGTGCCTGTTCTCTATATTATTGGAGCATTTATTCCAGCGACGATGATTGCTGTGCTATATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATAATATGTGGTCTTATTGGAATTCCCCCATCAAATGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGTTACTTAGAAACAAGCTTGTTGCAAAAGCTAGAAGTTGTATGAGAAAGCAAGAAAACCTGGGACAAGTATATGGAAGTATGCAAGATGCTTATTGGCAGATGCAAAGCCCTCTAGCTCACCAGGAACCTTCCTCTCAGGGACTAAAAGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCTTGGGGAGCATAGAGGCTCCAGTTGATGAGTCAATATTTGATATTGAGAAGGAAATCGACGACTTGTTGCCTGTCGAGGTTAAAGAACAGCGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAGGATGTGTTGCAGCAATGCCTTTGCTAAAAAGGATTCCAACTTCTGTACTGTGGGGCTATTTTGCTTTCATGGCCATCGAAAACTTACCCGGCAACCAGTTCTGGGAGCGGATTTTACTAGTTTTCACTGCTCCAAGTAGACGATACAAAGTTCTGGAGGAGTGCCATGCAACTTACGTGGAAACTATACCTTTCAAGACAATAGCAGTATTTACAGTCTTCCAAACTGCTTACTTGCTTGTTTGTTTTGGTATCACGTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGATGATCATGCTTCTGGTTCCTGTAAGACAATACATTTTGCCCAAGTTCTTCAAAGGGGCACACCTTCAGGATTTAGATGCTGCAGAATATGAAGAAGTACCTGCTTTACCATTTGAACTAGCTACTGAAGGTAACTTGAGCAGGACAGCTTCATTTGCAGATGATGGAGAGATTCTAGATGGAATGATTACTCGAAGCCGGGGTGAGTTTAGACGTGTTTGCAGTCTGAAGGTGGTGAGCTCCCCTGGAACTCCATCCAAAGAGTTGACAGGTATTCAAAGTCCAAGGTTCTCAGATAAAGTATACAGCCCTAGGGTAAACCAACTCAGAGAAAATCATAGCCCTCGAGGTGTTGGGAGAGGACCATTTAGCCCTGGAGAAGCTAAGCCATCGAATTTGAGAAAGAGTGGATAA 2136 0.4288 MEETFVPFRGIKNDLQQRLMYYKQDWIGGLTAGFRILAPTTYIFFASAIPVISFGEQLERDTGGILTAVQTLASTAVCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRPDLGSKLFLAWTAWVCIWTAILLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIRGLIHEFRIPERSDLTLPEFESSWRFGNGMFALILSFGLLLTALRSRKARSWRYGSGCLRGFIADYGVPLMVLIWTAVSYIPAGSTPNGIPRRLFSPNPWSPGAYENWTVIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAKARSCMRKQENLGQVYGSMQDAYWQMQSPLAHQEPSSQGLKELKESTIQLASSLGSIEAPVDESIFDIEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPLLKRIPTSVLWGYFAFMAIENLPGNQFWERILLVFTAPSRRYKVLEECHATYVETIPFKTIAVFTVFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALPFELATEGNLSRTASFADDGEILDGMITRSRGEFRRVCSLKVVSSPGTPSKELTGIQSPRFSDKVYSPRVNQLRENHSPRGVGRGPFSPGEAKPSNLRKSG* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2740 711 PANTHER BORON TRANSPORTER 3-RELATED 1 702 - -
Lja6g2740 711 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Lja6g2740 711 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Lja6g2740 711 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Lja6g2740 711 Gene3D Helical hairpin bin 18 60 - -
Lja6g2740 711 MobiDBLite consensus disorder prediction 655 684 - -
Lja6g2740 711 MobiDBLite consensus disorder prediction 655 711 - -
Lja6g2740 711 PANTHER ANION EXCHANGE PROTEIN 1 702 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2740 Lja-Chr6 56428730 56433729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2740 1 695 Antiporters AT3G62270 76.868 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2740 K24194 - gmx:100795777 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2740 6 56428730 56433729 Lja6g2740 6 56428730 56433729 ECH