Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2737 ATGTCCATGGAAGCTGAGACTGCCACCACTTCTCACTTGGCGCTGTCTGACACAGATATCAACTGGGACAGGTTGGATAAGACCAAATTTCATGTCATTGGTGCCATACTCTTCACTGCTCAATCAGGCTTACTTCATCCAACGGCAGTGGTGAAGACAAGGATGCAAGTGGCTGGGTCTGGACTCTCTCAAATGTCAGGAATGTCAGTGTTCACTCACATTCTGCGGAGTGATGGTGTTCCTGGAATCTTTAGAGGTTTTGGCACTTCTGCTATTGGATCAATGCCTGGCAGGGTCTTAGCCCTCACATCACTTGAGATGTCAAAGGACTTAATGTTAAAACACACTCAAGGTACTGCAATGCCTGAAGCATCACGTATTGGCCTTGCAAATGGGGTGGCTGGCATGGTGTCAAATTTGGTATCCTGTGTGTACTTTGTGCCTTTGGATGTGATATGCCAGAGGTTAATGGTCCAAGGTCTTCCCGGAACTACATGTTGTAGAGGGCCATTTGATGTTATCCGGAGAGTTGTCAAGGCGGAGGGTTTTCGCGGTTTGTATAGAGGTTTTGGATTAACAGCAGTAACCCAATCACCAGCATCTGCACTTTGGTGGGGTTCTTATGGTGCAGCTCAACACATAATTTGGAGGAGTTTGGGCTACAAAGATGATATGGAGAACAAACCTTCACACGTGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTAGCTGGTGCATGTTCCTCTGTTATCACTACCCCCATAGATACTGTTAAAACACGTCTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTGCTGAAGACAGCAAAGAATCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGTTTTGGACCAAGATTTTTAAACATGTCACTTTATGGAACAACAATGATTGTTACTTATGAACTGATAAAGAGATTATCAGTACAACCGAGTCTAAGGTCTTTTTCTTAG 993 0.4502 MSMEAETATTSHLALSDTDINWDRLDKTKFHVIGAILFTAQSGLLHPTAVVKTRMQVAGSGLSQMSGMSVFTHILRSDGVPGIFRGFGTSAIGSMPGRVLALTSLEMSKDLMLKHTQGTAMPEASRIGLANGVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTCCRGPFDVIRRVVKAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDMENKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTAKNLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPSLRSFS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2737 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Lja6g2737 330 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Lja6g2737 330 Pfam Mitochondrial carrier protein 237 321 IPR018108 -
Lja6g2737 330 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Lja6g2737 330 Pfam Mitochondrial carrier protein 33 115 IPR018108 -
Lja6g2737 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 111 IPR018108 -
Lja6g2737 330 PANTHER OS01G0329400 PROTEIN 1 323 - -
Lja6g2737 330 Gene3D Mitochondrial carrier domain 32 325 IPR023395 -
Lja6g2737 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Lja6g2737 330 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2737 Lja-Chr6 56386274 56389433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2737 17 320 Chloroplast and Mitochondria Gene Families AT5G15640 50.654 9.82e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2737 K15121 - gmx:112997745 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2737 6 56386274 56389433 Lja6g2737 6 56386274 56389433 ECH