Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2717 ATGATGATGATGGAGATTGAATCCAAGTGGGTGGTCTTCATGGCCATTGCTGTTTTCATGTTGAGATACCTTCTCAAGAATGTAAATTGGTGGTTGTATGAATCTAAATTGGGTAAGAAGCAGTACTCACTTCCCCCTGGTGACATGGGCTGGCCCTTCATTGGCAACATGTGGTCTTTCCTTAGAGCTTTCAAGTCCAGGGACCCTGATTCCTTCATGTCCTCCATTGTCTCTAGATATGGACGAACCGGAATATACAAGGCCTTCATGTTTGGAAACCCAAGTGTGATTGTGACAACCCCTGAAGCATGCAAGAGAGTTCTGACAGATGACACTAAATTTGAACCTCGTTGGCCTCGCACTATATTAGAACTCATGGGAAAGAAGTCATTCGTTGCAATTGAGTATGAAGAACACAAGCGCCTCAGGCGCCTGACATCATCTTCAATCAATGGGATGGGAGCATTGTCTCTGTACTTGACATACATTGAAGAAAATGTTATAAGTTCCTTGGAGAAATGGTCCAACATGGGAGAAATTGAGTTCTTAACTCAGATGCGGAAGCTTACTTTTAAAGTCATCATGCATATTTTCCTTAGCTCAGAAAGTGAACCTGTCATGGAGGCTTTGGAAAAAGAATTCACAGAACTTAACCACGGACTTAGAGCCATGCGGATTAATATTCCTGGATTTGCTTACCACAAGGCATTCAAGGCAAGGAAAAAACTAGTTGCCATATTCCAATCTATTGTGGATGAGAGAAGAAAGCAAAGGAAGGAATTTGTACCCCAAAAAGTCAAAGATATGATGGATGCTTTGATAGATGTTGAAGATGATAAAGGGAGAAAGTTGGGTGATGAGGAACTAATTGATATAATGTTGATGTACGTGAATGCTGGTCACGAATCTTCAGGACATGCCACCATGTGGGCGACTTATTTCCTGCAAAAGCACCCAGAATATCTCCAAAAGGCTAAGGCAGAACAAGAAGAAATTATAAAGAAAAGACCTCCAACACAGAAAGGATTGACTCTTAAGGAAATTCGACAGATGGATTTTCTTTATAAGGTGATTGATGAAACATTGCGTTTGATTACAATCTCACTTATGTCATATCGGGAGGCAAAATCTGATGTCAATATAAATGGTTACCTCATTCCAAAAGCTTGGAAAGTGTTGGTTTGGTATAGGTCAGTTCATCTTGATCCAGAAATATATCTTAATCCAATGGAATTTAATCCTAATAGATGGAATAAGGAACACAAGGCTGGGGAATTCCTTCCCTTTGGAGCAGGGCGTAGATTGTGTCCAGGCAATGATCTAGCCAAAATTGAAGTTGCAGTTTTTCTTCATCATTTCATCATGAATTACCAGCTTGAACAAGTTAATCCTGAATGCCGAGTGAGATACTTACCGCATACAAGGCCCATGGACAATTGCTTGGCAAGGATCAGGAAATGCTCACCTTCATCAACCTAA 1479 0.407 MMMMEIESKWVVFMAIAVFMLRYLLKNVNWWLYESKLGKKQYSLPPGDMGWPFIGNMWSFLRAFKSRDPDSFMSSIVSRYGRTGIYKAFMFGNPSVIVTTPEACKRVLTDDTKFEPRWPRTILELMGKKSFVAIEYEEHKRLRRLTSSSINGMGALSLYLTYIEENVISSLEKWSNMGEIEFLTQMRKLTFKVIMHIFLSSESEPVMEALEKEFTELNHGLRAMRINIPGFAYHKAFKARKKLVAIFQSIVDERRKQRKEFVPQKVKDMMDALIDVEDDKGRKLGDEELIDIMLMYVNAGHESSGHATMWATYFLQKHPEYLQKAKAEQEEIIKKRPPTQKGLTLKEIRQMDFLYKVIDETLRLITISLMSYREAKSDVNINGYLIPKAWKVLVWYRSVHLDPEIYLNPMEFNPNRWNKEHKAGEFLPFGAGRRLCPGNDLAKIEVAVFLHHFIMNYQLEQVNPECRVRYLPHTRPMDNCLARIRKCSPSST* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2717 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 Pfam Cytochrome P450 45 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 SUPERFAMILY Cytochrome P450 40 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PANTHER CYTOCHROME P450 26 16 487 - -
Lja6g2717 492 PANTHER ENT-KAURENOIC ACID OXIDASE 2 16 487 - -
Lja6g2717 492 Gene3D Cytochrome P450 34 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 Coils Coil 207 227 - -
Lja6g2717 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Lja6g2717 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2717 492 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2717 Lja-Chr6 56152582 56158498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2717 10 484 Cytochrome P450 AT1G05160 64.570 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2717 K04123 - gmx:100781238 827.78