Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2700 ATGGCGGCAGTTGTGGGTGAAGCTTTTCTCTCTGCTTTTATTGAAGTTGTTATAGACAAGCTTGCTTCTCCTGAGTTTGTTAACTTCATCCGAGGGAAGAAGCTTGATGATAATTTGCTCCAACGGCTGAAGAACACTCTGTATGCTGTTGAAGCAGTGCTGAATGATGCTGAGCAGAAACAGATCAAGGACTCTGCAGTGAACAAGTGGCTCGATGACCTCAAAGATGCTGTCTATGTTGCTGATGACTTTCTGGATCATGTTGCTACTAAAGCTGCCACTCAAAAGAAGGAGGTAAGCAACTTCTTCTCTCGCTACTTCAATTTTCAAGACAGGGACATGGTTAATAAGTTGGAAGACATAGTTGAAAGACTGGAATCTATTTTCAAACTCAAAGACATTCTTGGTCTTAAAGAGGTTGCCAAGGAGAATTATTCATGGAGACTCCCATCTTCCCCTCTTGAAGACGGATCTAATATCTATGGCAGGGATCAAGACAAAGAAGCTATCCTCAAATTATTGCTAGATGATGATATGAGTGATGGTAAAGTAGGTGTGATCCCTATTGTTGGTATGGGTGGAGTGGGAAAAACAACTTTAACCCAAGTGGTCTATAATGATGAAAATTTAAAGCAGGAATTTGATTTGCAAGCATGGGTTTGTGTTTCTGATGAGTTTGATATTCTCAAGGTTACTAAGACTATCACACAGGCAATTACCAAAAGTAATTGTGGTCTGAACGATATAAGTTTACTCCATCTTGAATTGAAAGAGAAGTTGATGGGGAGGAAATTCTTAATAGTTTTGGATGACGTTTGGTTGGAGGATTATGTTACTTGGAATTTTCTTATAAAACCTCTTCAATTTGGGACTAAGGGAAGCAAGATTCTCGTGACGACACGTAGCGAAAAAGTTGCTTCCCTAATCCAAACTTCTCAAGGTTATCGTCTAAAGCAATTGTTGGATGAAGATTGTTGGTTAGTCTTTGCGAACCATGCATGTTTTTCATCAGCATCTAATGGGAACACAACTCTTGAAAAAATTGGCAGACAAATTGTTAAAAAGTGTGATGGGTCACCTTTAGCAGCACAATCACTTGGAGGCTTATTGCGAGGTAAAAATGATATAAAAGACTGGAATAATATATTGAACTCCAACATTTGGGAACTTTCTGAAAATGAGAGCAAGATTATTCCAGCACTGAGAATTAGTTATCATTATTTACCTCCATTTTTGAAACGTTGCTTTGTTTATTGTTCATTGTATCCTAAGGATTATGAATTTGAAAAAGATGAGTTAATCTTGTTGTGGATGGCGGAAGATCTTTTACCGCCTTCAAAAAGTGGAAAGACTTTAGAAGAAGTCGGTTGTGAGTATTTTGATGATTTGGTATCGAGATCATTTTTTCAACCTAGAACTAGGTACATGAAGGGTTGTTTTGTGATGCATGATCTTGTGCATGATTTAGCGATCCTACTCGGTGGAGAATTCTACTTTAGATCCGAAGAACTTGGGAAAGAATCTAAGATTTGTATGAAGACTCGTCATTTGTCTTTGAGTGGGTACATTGATCAAGTCTATGAAAAATCTGATTTCTTTGGCAGAGTTAAATTTTTGAGGACTCTCTTACCAATTGATATTAAAGATTCTCCATTCAACAGTGACAAGGCAGCATGCGTCATTATCTCGAATCTGAAGTACTTAAGAGTCCTGTCATTTAGTAGGTTTCGGGATGTTGAAGCATTACCAAATTCAATTGGTGAGTTGATTCATTTGAGATATTTGGACCTCTCTCGCACAAGCATAAAGACATTACCAGAGTCATTGTGTAATTTATACAATCTACAAACGTTGAAATTGTTTGGGTGTTCATTGCTGATTATGTTACCTGATGGTATGCAAAATCTTGTAAATTTGCGTCATCTTGATATTCGTCTTACTAAAATAAAAGAGATGCCCAAAGGATTGACTGGATTAAAAAATTTGCAATATTTAAGTGACTTTATTGTGGGCGAGCATGAAGGGCAGAGGATCAAAGAATTGGGAAAGCTTTCAAATTTACATGGATCACTTGCAATTTTCAATTTGCAGAATGTTGCCAATGGTTATGAAGCGTTGGAGGCAAAGGTAGCGGATAAGAAAAACCTCGATGAGTTACACCTGCTTTGGTCTCTTGAGAGCAATTTTACAGATTCTGTAACTGAAATGGACATTCTTGACAAGTTACAACCTCACCAAGACCTGAAGCATATATCAATATCTGGGTACAGGGGCACTAAATTTCCAGAATGGGTTGGACATTCTTCCTACCACAACATGACTGAGCTATATCTATGGGATTGTATGAATTGTTGTATGCTTCCTTCACTTGGACAACTACCCTCTCTCAAGACACTATATATTATCCGATTGAACGGGGTTGAATTTTTGAAGAGCGACGATTCCTTTTCAGGGACACCTTTTCCCTCCCTTCACAATCTGACATTTATAGACATGCCGAGTTGGGAGGTGTGGCGTCCCTTTGAATCAAATGCCTTTCCTCAACTACAGTACCTCAGAATAGACAACTGTCCCAGATTAAGGGGAGATTTGCCAAATAACCTTCCAGCTTTGGAATCACTTGAAATTAGCAGATGTGAGCAGCTTGCTTCTTCTCTTCCAAGGGCTCCTGCCATCCGCCGTTTAGAGATACGTGAAAGCAATAAAGTATCATTGCGGGAGATGCCCATTTCGGTGGAAGATCTATATATCAAAGGAAGCGAGGTGGTGGATTCCATGTTGGAGGCCACCGCCATCACCCAACCAACTTCCCTTCGATCTTTATCTTTAGGGAATTGTTCATCTGTCAGATCATTCCCGGGAGATTGTTTACCTGCATCACTGAAGAACTTGCGTATCAAGGATTTCAGGAAGCTAGAATTTCCAAAGCAGCAGCACGAGTTACTTCAGTCGCTGTATATAAATAGTAGCTGTGATTCTCTCACATCCCTCCTGTTGGAGAGCTTTCCAAATCTCCATTCTCTCACGATCAAAAACCTTGAAAATCTGGAAAGTCTTTCTCTTTCAGTACGGGGGGATGGTGCTCTCACAGATTTATCTGCTCCCGGTATGACTCAATTATCCGTCTCTGATTGCAACAAGTTAAAGTTCTCTGTCTTTGATTGCGAAAAGTTAAAGTCATTACCTTGTCACATGAGCACCCTTCTCCCAAAGTTAGAATCTCTCGTGATAGACAATTGCCCAAAAGTTGAGTCATTTCCTAGTATGCCGCGTAGCTTGAGATCACTTGAGATCTGGAACTGCGAGAAATTGATGAGGAGTCCATCTCTAGCTTCAGTGGACATGCTCACGCATCTTACCATTGGAGGTCCATGTGACGGTGTCAAGTCCTTCACGGAGGTGAGTTTGGTGTTGCTGCCTCCCTCCCTTACTTCCCTGATGTTACTTGAGTTAACAAGTATGGAGACGTTGGACTGCAAGGGGCTTCTCCACCTCACCTCCCTGCAACAATTAACAATTTACCGCTGTCCGAAGCTGGAGAATGTGGTGGGAGAAAGGTTGCCTGCTTCTCTAATAAAACTTGAAATCATTGAGTGTCCTCTGTTGGAAGAACAGTGCAAAATGAAGCACCCGAAAATTTGGCCCAAAATTTCCCACATCCGAGGCATTATGGTTAATGACAGATGGATTTTTTGA 3696 0.4026 MAAVVGEAFLSAFIEVVIDKLASPEFVNFIRGKKLDDNLLQRLKNTLYAVEAVLNDAEQKQIKDSAVNKWLDDLKDAVYVADDFLDHVATKAATQKKEVSNFFSRYFNFQDRDMVNKLEDIVERLESIFKLKDILGLKEVAKENYSWRLPSSPLEDGSNIYGRDQDKEAILKLLLDDDMSDGKVGVIPIVGMGGVGKTTLTQVVYNDENLKQEFDLQAWVCVSDEFDILKVTKTITQAITKSNCGLNDISLLHLELKEKLMGRKFLIVLDDVWLEDYVTWNFLIKPLQFGTKGSKILVTTRSEKVASLIQTSQGYRLKQLLDEDCWLVFANHACFSSASNGNTTLEKIGRQIVKKCDGSPLAAQSLGGLLRGKNDIKDWNNILNSNIWELSENESKIIPALRISYHYLPPFLKRCFVYCSLYPKDYEFEKDELILLWMAEDLLPPSKSGKTLEEVGCEYFDDLVSRSFFQPRTRYMKGCFVMHDLVHDLAILLGGEFYFRSEELGKESKICMKTRHLSLSGYIDQVYEKSDFFGRVKFLRTLLPIDIKDSPFNSDKAACVIISNLKYLRVLSFSRFRDVEALPNSIGELIHLRYLDLSRTSIKTLPESLCNLYNLQTLKLFGCSLLIMLPDGMQNLVNLRHLDIRLTKIKEMPKGLTGLKNLQYLSDFIVGEHEGQRIKELGKLSNLHGSLAIFNLQNVANGYEALEAKVADKKNLDELHLLWSLESNFTDSVTEMDILDKLQPHQDLKHISISGYRGTKFPEWVGHSSYHNMTELYLWDCMNCCMLPSLGQLPSLKTLYIIRLNGVEFLKSDDSFSGTPFPSLHNLTFIDMPSWEVWRPFESNAFPQLQYLRIDNCPRLRGDLPNNLPALESLEISRCEQLASSLPRAPAIRRLEIRESNKVSLREMPISVEDLYIKGSEVVDSMLEATAITQPTSLRSLSLGNCSSVRSFPGDCLPASLKNLRIKDFRKLEFPKQQHELLQSLYINSSCDSLTSLLLESFPNLHSLTIKNLENLESLSLSVRGDGALTDLSAPGMTQLSVSDCNKLKFSVFDCEKLKSLPCHMSTLLPKLESLVIDNCPKVESFPSMPRSLRSLEIWNCEKLMRSPSLASVDMLTHLTIGGPCDGVKSFTEVSLVLLPPSLTSLMLLELTSMETLDCKGLLHLTSLQQLTIYRCPKLENVVGERLPASLIKLEIIECPLLEEQCKMKHPKIWPKISHIRGIMVNDRWIF* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2700 1231 Gene3D - 320 403 IPR042197 -
Lja6g2700 1231 PANTHER OS05G0414200 PROTEIN 17 947 - -
Lja6g2700 1231 Gene3D - 404 491 IPR036388 -
Lja6g2700 1231 PANTHER OS05G0414200 PROTEIN 938 1186 - -
Lja6g2700 1231 Gene3D - 142 314 IPR027417 -
Lja6g2700 1231 SUPERFAMILY L domain-like 934 1217 - -
Lja6g2700 1231 Pfam Rx N-terminal domain 9 105 IPR041118 -
Lja6g2700 1231 Gene3D Ribonuclease Inhibitor 530 923 IPR032675 -
Lja6g2700 1231 SMART LRR_typ_2 636 659 IPR003591 -
Lja6g2700 1231 SMART LRR_typ_2 589 612 IPR003591 -
Lja6g2700 1231 Coils Coil 40 60 - -
Lja6g2700 1231 Gene3D Ribonuclease Inhibitor 1009 1222 IPR032675 -
Lja6g2700 1231 SUPERFAMILY L domain-like 481 889 - -
Lja6g2700 1231 Gene3D - 14 124 - -
Lja6g2700 1231 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Lja6g2700 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 17 947 IPR044974 GO:0006952
Lja6g2700 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 419 IPR027417 -
Lja6g2700 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 938 1186 IPR044974 GO:0006952
Lja6g2700 1231 PRINTS Disease resistance protein signature 866 882 - -
Lja6g2700 1231 PRINTS Disease resistance protein signature 259 273 - -
Lja6g2700 1231 PRINTS Disease resistance protein signature 356 370 - -
Lja6g2700 1231 PRINTS Disease resistance protein signature 186 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2700 Lja-Chr6 56023907 56027735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2700 184 373 WRKY Transcription Factor Family AT5G45050 27.225 9.46e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2700 - - gmx:100784015 1430.62