Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2695 ATGCGATTCAAACTCGGCAAGCGCGTGACCCGGCACAAAATGGATCTTCAAGAGGTTCAATACCCGACCCGGATAACACCGATTGAATCCAACCCCGGCGAGAATCGGCAACGGAAGCACCATGGCGAAGCTTCTCACGTGGGGTCGGAGGCTGACCAAAGGAGCAAAGTCACTCTGCGCGAGAAACGGGTCAGGTTACATTCCGGTAGGATCCGACCCGGATCAGGGAAAGACTTGGCGGTGTACGTGGGGCAGAAAGACGGCGAGTTTCACCGCGTTCTGGTGTCGGTGGTGTACTGCAACCACCCTTTGTTCGGGGATTTGTTGAGGGAAGCGGAGAGGGAGTACGGGTTTCACCACCCGGGTGGGATCACGATTCCTTGCCGGGTCACCGAGTTTGAACGCGTGAAGACCCGAATTGAGTCCGGGTCGGGTGTCCGTGGCGGTTTGGTGGTTATTGAGAAAGTTTATGCTAATGTTCCTCCTTCATTGGATGGCCCATGTTTGGAAGGGGATGATGTTGTGGTGCTTTTAGGAATGGCTTCACCGGAAACGCGTGACAGCAACACGAATGTGAAGTGGTGTGCACCGCCAGTGGGAAGGATTAAGATTAATATCGATGCGTCGGTTCGGAGTAATCAAGGTACAAGTTTTGGTATGGTAGCCCAGAACTGTCGGGGTGAGGTACTAGCCGTTGCAACAGAGGTGCCTAAGGAGTTGTCCCCTCTGCTGGCCGAGGCTTTATGTTGCAGATGGGCCTTGGGTTTGGCTCGTGAACTTGGCTTTGGAAGGATTATTGTGGAGACTGCTTGTTTACTCCTTTATAAAGCATGGATGGTTAAGTTACATAAACCATCATATCTCCCGTCTATAGTGTAG 879 0.5256 MRFKLGKRVTRHKMDLQEVQYPTRITPIESNPGENRQRKHHGEASHVGSEADQRSKVTLREKRVRLHSGRIRPGSGKDLAVYVGQKDGEFHRVLVSVVYCNHPLFGDLLREAEREYGFHHPGGITIPCRVTEFERVKTRIESGSGVRGGLVVIEKVYANVPPSLDGPCLEGDDVVVLLGMASPETRDSNTNVKWCAPPVGRIKINIDASVRSNQGTSFGMVAQNCRGEVLAVATEVPKELSPLLAEALCCRWALGLARELGFGRIIVETACLLLYKAWMVKLHKPSYLPSIV* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2695 292 PANTHER SMALL AUXIN-UP RNA-RELATED 78 148 - -
Lja6g2695 292 MobiDBLite consensus disorder prediction 33 57 - -
Lja6g2695 292 Pfam Reverse transcriptase-like 205 279 IPR002156 GO:0003676|GO:0004523
Lja6g2695 292 MobiDBLite consensus disorder prediction 24 57 - -
Lja6g2695 292 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 78 148 IPR003676 GO:0009733
Lja6g2695 292 Pfam Auxin responsive protein 79 137 IPR003676 GO:0009733
Lja6g2695 292 CDD RNase_H_like 204 274 IPR044730 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2695 Lja-Chr6 56006796 56008340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2695 7 142 Calmodulin-binding Proteins AT3G43120 35.036 1.61e-11 59.7