Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2668 ATGTTTCTGCAACTTGCACCTTACATGATCGTTTTGATCATAGTCTCCATGTCTCCATTGGCATCTGCACAACTAGATTATCCAGACACGGTGAATCCCGATTGTAATTCAAGATGTGGAGGAGTAAGGATCGCCTACCCTTTCGGAATGGGGGATCCAACGTGCTACGCAGACAAATGGTTCGAAATAGAATGCAGAAACACCTCTCGACAAGGTTCAAAACCGTACCTGAAATCGATAAACCTGGAGATAAGTAACATCGATTCAGGATCAAGTTACTTGCACATCATGAACCCTGTTTTCCGGTGGAACTGCAACAAGAGCAGTGATGCTAAGCCAGAGGTGAATCTCACAGGAAGCCCTTTCGTGTATTCCAAGGATCGCAACAAGTTCACCGCCATCGGCTGCAACAAGATGGCATATTTGCAATCGAACGGATCCAAAGTTAGCGGTTGCGTCTCCCTCTGTGATCAGTATGATGACAGAGAGGTTAACAGCAACGTAGCCTACGGCAGCGACGGTTGTGTTGGCAGATTCTGCTGCGAGACTTCGCTTCCGTCGTATCTGGTGGAGTATAACGTGACACTTGAAGAACTGACGAGTGGTGGTGGTGGTGGTGGTCGGTGTAGTCAAGCGTTGATTGGAACAGTGGATTGGAACAGAGTGTACCCTGAAACTGGTGGTGAAGAGTATCGGAGCTTTCGTGATCTGGATGTGGATTATGTTCGTGCGGTGCTTTCATGGGTGGTTTTTAACTCGTCGGCGGCGATGAAGACGCTGCCGGTTGGTAATAACTGCACTATGGCTGCAAATTCTCCATATAGAGGTTCTGGTTGGGTTTGTGATTGCTACACTGGTTACTATGGCAATCCATACATTGGTGGTGGCTGTATTGAGGTGAATCTCACAGGAAGCCCTTTCGTGTATTCCAAGGATCGCAACAAGTTCACCGCCATCGGCTGCAACAAGATGGCATATTTGCAATCGAACGGATCCAAAGTTAGCGGAGTTTCATCAGGTCTCGGATCCATCATTTTCATCCTTGGTCTGTGGTTCTTGTATAAATTTGTGAGGAAAAGAATGATAGAAAAACGCAAACAAAAATTCTTCAAGAAAAATGGTGGCATGTTGTTGAAACAAAGAATGTCCTCTGGAGAAGTTAATGTTGACAAAGGAATACTCTTCAGCCTGAGAGATTTAAAGAAGGCCACTGACAACTTCAACACGAACAGAGTTCTAGGAAAGGGAGGCCAAGGTACCGTTTACAAAGGCATAAATGTGGTCAAGTTACTAGGATGTTGTTTGGAAACAGAAATTCCCTTGCTTATTTATGAGTTCATTCCAAATGGTAATCTTTTCCAGTATTTGCATGATCAAAATAAGGACTTAAAAGTGACTTGGGACATGCGTTTGAGAATTGCCACTGAAATTGCAGGAGCTTTGTTTTACTTGCACTCAGTTGCATCTCAACCCATTTATCACAGAGATGTCAAATCAACAAATATATTGCTGGATGAAAAGTACAGGGCAAAATTAGCAGATTTTGGAGCCTCTAGGATAATTTCTGTTGAAGCTACTCACCTCACCACAGTAGTTCAAGGAACTTTTGGATACTTGGACCCTGAATATTTTCATACTAGTCAATTCACTGAAAAGAGTGATGTCTATAGCTTTGGAGTGGTTCTTGCTGAAATTTTAACCTGTCAGAAAGCAGTGTCCTTTGCAAGACCTGGGGAATCCAAGAACTTAGCTTCATATTTTGTTCAGTGCATGGAGGATAATAGTCTTTTTGATATTGTTGACAAAAGAATCACAAAGGAAGGGAAGAGAGAACATGTCATAGCAGTTGCTAATCTTGTGAAGAGATGCTTAGAGTTGAATGGGAGAAAACGACCAACTATGAAAGAAGTCACATTAGAATTGGAAGACATCCGGAAATTGGAGAGGAAGTCTAATTATCCAAACACGGTACATCCCGATTGTGATTCAATATGTGGAGATGTAACGATCACTTACCCTTTCGGAATGGGGGATCCAACGTGCTACGCAGACAAATGGTTCGAAGTTGAGTGCAGAAACACCTCCCAAGGTTCAACACCGTACATAAAATCGATAAACCTGGAAGTAACATCAATGAATCCAGGAATAAGCAACGTGGAAGTCATGAACCCTGTTTTCCGGTGGAACTGCAAGAAGAGCAGAGATTCTAAGCCAGTGGTGAACCTCACAGGAAGCCCTTTCGTGTATTCCAAGGATTACAACAAGTTCATTGCCATCGGCTGCAACAAGATTGCGTTTTTGCAATCGAACGGATCCAAAGTTAGCGGTTGTGTCTCCCTCTGTGATCAGTACGATGACAGTGAGGCGAGCAAAAACATCTACGATAGCGACAATTGTCTTGGTAGGCTTTGCTGCCAAAATTCGCTTCCATCGTACCTGGTGGAATTCAACGTGACGCTTGAAGATCTGAAGAGTAATGATAATGAGAGTGGTGGTGGTGGTGATGGTGATCAATGCAGTCAAGCATTGATAGGAACATGGGATTGGAACGAGGTATATTTTGGGTCTAGTTACGTGTACCTAAGCATTCTTGACCTGGATGTGGATTATGTTCGCGCCATGCTTTCATGGGCAGTTTTCAACTCGTCATCGTTCAAGCTACCTTCAGATGCTAACTGCAGTTTGCAAGCTACCTATAATGTCCCAGCTTTGGTTTGTGACTGCTACACCGGCTTCTATGGCAATCCCTACATTGATCATGGTTGTGTTGGAGTTTCATCAGGTCTCGGTTCCATCATTTTCATCATTGGTCTGTGGTTCTTGAATAAAGTTGTGAGGAAAAGAATGAAAGAGAAACTCAAACAAAAATTCTTCAAGAAAAATGGTGGTTTGTTGTTGAAACAAAGAATGTCCTCTGGAGAAGTTAATGTTGACAAAGGAATACTCTTCAGCTTGAAGGATTTAAAGAAGGCGACTGACAACTTCAACATGAACAGAGTTCTCGGAAAGGGAGGCCAAGGTACCGTTTACAAAGGCATGTTAGTAGATGGTAGAATTGTTGCAGTGAAAAAGTTTAAGGTGGAAGGGAACATCGAAGAATTCATCAACGAGTTCGTCATTCTTTCACAAATCAACAACAGAAATGTGGTGAAGTTACTAGGATGTTGTTTGGAGACAGAAATTCCCCTGCTTATATATGAGTTCATTCCAAATGGTAATCTTTTCCAGTATTTGCATGACCAAAATGAGGACTTAAAAGTGACTTGGGACATGCGTTTGAGAATTGCCACTGAAATAGCAGGAGCTTTGTTTTACTTGCACTCAATTGCATCTCAACCCATTTATCACAGGGATGTGAAATCAACAAATATACTACTGGATGAAAAGTACAGGGCAAAATTAGCAGATTTTGGAGCCTCTAGGCTAATTTCTGTGGAAGCTACTCACCTCACCACAGCAGTTCAAGGAACTTTTGGATACTTGGACCCTGAATATTTTCATACTAGTCAATTTACTGAAAAGAGTGATGTCTACAGCTTCGGAGTGGTTTTAGCTGAACTTTTAACCGGCCAGAAGGCAGTATCATTTGCAAGATCTGGGGAATCCAAGAATTTAGCTTCATATTTTGTTCAGTGCATGGAGGAGAATAGTCTTTTTGACATTGTTGACAAAAGAATCACAAAGGAAGGGAAGAGAGAACATGTCATAGCAGTTGCTAATCTTGTGAAGAGATGCTTAGAGTTGAATGGGAGAAGAAGACCAACTATGAAAGAAGTCACATTAGAGTTGGAAGAGATCCGGAAATTGGAGAGGAAGTCTAGTAATGCAGAACAAAATCATGAAGAAGTTGAGGTTGTTGGAATTGAAGACTACCAACAACCTTGGATTGGATATTCTACAACATCCAATTCATTTCCAACTCTAAGCAGCAGAACACTCTCGTCAGACTCAGGGACTATGCATATTGTTGAATTAGAATAA 3981 0.4215 MFLQLAPYMIVLIIVSMSPLASAQLDYPDTVNPDCNSRCGGVRIAYPFGMGDPTCYADKWFEIECRNTSRQGSKPYLKSINLEISNIDSGSSYLHIMNPVFRWNCNKSSDAKPEVNLTGSPFVYSKDRNKFTAIGCNKMAYLQSNGSKVSGCVSLCDQYDDREVNSNVAYGSDGCVGRFCCETSLPSYLVEYNVTLEELTSGGGGGGRCSQALIGTVDWNRVYPETGGEEYRSFRDLDVDYVRAVLSWVVFNSSAAMKTLPVGNNCTMAANSPYRGSGWVCDCYTGYYGNPYIGGGCIEVNLTGSPFVYSKDRNKFTAIGCNKMAYLQSNGSKVSGVSSGLGSIIFILGLWFLYKFVRKRMIEKRKQKFFKKNGGMLLKQRMSSGEVNVDKGILFSLRDLKKATDNFNTNRVLGKGGQGTVYKGINVVKLLGCCLETEIPLLIYEFIPNGNLFQYLHDQNKDLKVTWDMRLRIATEIAGALFYLHSVASQPIYHRDVKSTNILLDEKYRAKLADFGASRIISVEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAEILTCQKAVSFARPGESKNLASYFVQCMEDNSLFDIVDKRITKEGKREHVIAVANLVKRCLELNGRKRPTMKEVTLELEDIRKLERKSNYPNTVHPDCDSICGDVTITYPFGMGDPTCYADKWFEVECRNTSQGSTPYIKSINLEVTSMNPGISNVEVMNPVFRWNCKKSRDSKPVVNLTGSPFVYSKDYNKFIAIGCNKIAFLQSNGSKVSGCVSLCDQYDDSEASKNIYDSDNCLGRLCCQNSLPSYLVEFNVTLEDLKSNDNESGGGGDGDQCSQALIGTWDWNEVYFGSSYVYLSILDLDVDYVRAMLSWAVFNSSSFKLPSDANCSLQATYNVPALVCDCYTGFYGNPYIDHGCVGVSSGLGSIIFIIGLWFLNKVVRKRMKEKLKQKFFKKNGGLLLKQRMSSGEVNVDKGILFSLKDLKKATDNFNMNRVLGKGGQGTVYKGMLVDGRIVAVKKFKVEGNIEEFINEFVILSQINNRNVVKLLGCCLETEIPLLIYEFIPNGNLFQYLHDQNEDLKVTWDMRLRIATEIAGALFYLHSIASQPIYHRDVKSTNILLDEKYRAKLADFGASRLISVEATHLTTAVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGQKAVSFARSGESKNLASYFVQCMEENSLFDIVDKRITKEGKREHVIAVANLVKRCLELNGRRRPTMKEVTLELEEIRKLERKSSNAEQNHEEVEVVGIEDYQQPWIGYSTTSNSFPTLSSRTLSSDSGTMHIVELE* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2668 1326 ProSiteProfiles Protein kinase domain profile. 324 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2668 1326 SUPERFAMILY Protein kinase-like (PK-like) 393 654 IPR011009 -
Lja6g2668 1326 Pfam Protein tyrosine and serine/threonine kinase 996 1262 IPR001245 GO:0004672|GO:0006468
Lja6g2668 1326 Pfam Protein tyrosine and serine/threonine kinase 425 640 IPR001245 GO:0004672|GO:0006468
Lja6g2668 1326 SUPERFAMILY Protein kinase-like (PK-like) 981 1267 IPR011009 -
Lja6g2668 1326 Gene3D Transferase(Phosphotransferase) domain 1 447 661 - -
Lja6g2668 1326 Gene3D Transferase(Phosphotransferase) domain 1 1069 1292 - -
Lja6g2668 1326 Pfam Wall-associated receptor kinase galacturonan-binding 661 716 IPR025287 GO:0030247
Lja6g2668 1326 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Lja6g2668 1326 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 426 650 - -
Lja6g2668 1326 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 301 339 - -
Lja6g2668 1326 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 14 299 - -
Lja6g2668 1326 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 340 426 - -
Lja6g2668 1326 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 659 1323 - -
Lja6g2668 1326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1114 1126 IPR008271 GO:0004672|GO:0006468
Lja6g2668 1326 ProSiteProfiles Protein kinase domain profile. 995 1266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2668 1326 Gene3D Phosphorylase Kinase; domain 1 963 1068 - -
Lja6g2668 1326 Coils Coil 1259 1286 - -
Lja6g2668 1326 SMART serkin_6 407 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2668 1326 SMART serkin_6 995 1272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2668 1326 CDD STKc_IRAK 1001 1266 - -
Lja6g2668 1326 Gene3D Phosphorylase Kinase; domain 1 379 426 - -
Lja6g2668 1326 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 299 IPR045274 GO:0007166
Lja6g2668 1326 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 340 426 IPR045274 GO:0007166
Lja6g2668 1326 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 426 650 IPR045274 GO:0007166
Lja6g2668 1326 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 659 1323 IPR045274 GO:0007166
Lja6g2668 1326 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 301 339 IPR045274 GO:0007166
Lja6g2668 1326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2668 Lja-Chr6 55695355 55725635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2668 30 645 Receptor kinase-like Gene Family AT1G79680 39.887 3.01e-145 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lja6g2668 PK_Tyr_Ser-Thr 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2668 - - gmx:100798794 844.343