Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2663 ATGAAGCTCTTTAGGCTTTTAGTGTTATCTTTATCTTTCTTATCAGTTGTGGGGCAGCTTCCTTCCCAGGACATTCTAACATTGCTGGAATTTAAGAAATGTATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCCTCTTCATGGAATGGAGTTTTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACATGGGTCTCTCAGCTGATGCTGACTTAAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGTCGAACAATTTCATGTCAGGAAAACTACCTGACAATGCTGCTGATTTCAAAAGCCTTGAATTCCTGGATATCTCCAATAACCTCTTTTCCTCACCTTTACCACCGGAAATTGGTAACTTTGGTAGCTTGCAGAATCTGTCATTAGCCGGGAACAACTTCTCTGGCCGAATTCCTAACTCCATTTCAGACATGGCTTCTATCAAATCTCTCGACTTGAGCCGCAACTCCTTGTCTGGAGCCCTGCCAGCATCATTGACTAAGCTGAATAATCTTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGACAAGATCTCTACCCTTGAAAAGCTTGACTTGCATGGGAATATGCTTGATGGTCCTTTAGATGTTGGATTTATGTTTTTATCAAGTGTCAGCTATGTTGATTTCAGTGATAACATGCTATCAAATTCTGATTCCCGGAAGCAGGAGTTTCTACCACGAATATCGGAAAGTATTAAGCATCTGAATTTAAGCCACAACCAGCTTACTGGGTCATTGGTTGGTGGAGCTGAGCAATCCATTTTCCAAAACTTGAAGGTTTTGGACCTCAGCTACAATCAGATGAATGGAGAGTTGCCTGGGTTTGATTTTGTTTATGATCTCCAGGTCTTAAAGCTTAGCAACAACAAATTTTCAGGATTTATTCCCAATGGCCTGCTAAAAGGAGACTCTCTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCTTTAGGTATGATTACATCTACAACACTTGGTGTTCTTAATCTCTCGTCAAATGGGTTCACTGGTGAGCTGCCGCCTCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAAATTTGAAGGAAATCTATCCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGCGGGAATCATTTGACAGGGGCCATCCCTGAGGTAACTCCTCAATTTCTGAGGTTAAATTATTTGAATCTATCCCATAATTCTATTAGCAGCTCCCTCCCAAGAGTCTTAGCACAGTATCCAAAGCTTAGCGTGCTTGATATCAGTTCCAACCAGTTAGATGGTCTACTTCTAGCTGATCTGCTCGCAATGCAGACATTGCAAGAGCTCCATCTTGAAAATAACATGATCTCTGGTGGCATCAACTTATCATCTTCTTCTGGCCAATCACATCTTCAAATTCTCGATCTTTCCCACAATCAGCTTAACAGTTATTTCCCTGATGAGTTTGGGTCATTGACTGACCTGAGAGTGCTCAATATTGCTGGAAATAATTTCTCCGGTTCTCTTCCAACAAGCATTTCTGACATGAGTTTTCTTGATTCTCTCGATATATCAGAGAATCATTTTACTGGTTCTCTACCAAATAACATGCCAAAGGGACTCAAGAACTTCAATGCTTCACAAAATGATCTGTCTGGAGTTGTCCCAGAAATTCTTAGAAACTTTTCTAGTTCTTCTTTCTTTCCTGGGAATACTAAGCTACGTTTTCCAAATGGTCCTCCTGGATCAACTATTTCACCTGCTGAAAGTTCCAAGAGAAAGTCTATGACCACTGTCGTCAAAGTAATAATTATAGTATCATGTGTGGTTGCTCTCATCATATTAATCTTGCTGGCTGTCTTCATACACTACATACGCATGTCAAGATCTCCACCAGAATATGATACAAGTAAGGATATCCGTGCGCGTCCCCAACCGGTTATCTCTGGCCCAATTCGCGCTTCGGACCGGGGAGGTGCTTTGGTTGTATCAGCTGAGGACCTTGTCAGTTCACGTAAAGGGTCACCGTCAGCGGAAATCAGCCCCGATGAAAAAACAGCAGCTGTAACCGGGTTCTCACCATCAAAACACAGCCACATTTCATGGTCACCAGAATCTGGTGATTCCTATACTGCTGATAGTCTTGCAAGGTTAGATACAAGATCACCAGATAGGTTGATTGGGGAGCTACATTTTCTGGATGATACGATATCATTGACGCCCGAGGAGCTCTCAAGGGCCCCAGCTGAAGTTTTGGGCAGAAGTAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTATATTGTTGAGAGTGAAGTGGTTGAGAGAAGGGGTGGCTAAACAGAGGAAAGAATTTGTTAAAGAGATAAAAAAATTTGCGAACATCAGGCATCCAAATGTCGTCGGATTGAGAGGATACTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTACATTTCACCAGGAAGTCTTGCAAGTTTTCTTTATGATCGACCAGGGAGGAAAGGCCCCCTAACCTGGGCCCAAAGGCTCAAATTAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTCGATCGTGCTGTTCCCCATGGGAACCTTAAAGCCACCAATGTGTTGTTAGATACACCCGATATGAATGCACGTGTCTCTGATTACTGCCTTCACCGGCTCATGACTCAAGCTGGTACCATGGAGCAGATTCTTGATGCTGGGGTCTTGGGTTACCGCGCACCAGAGCTAGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAGTCTGATGTGTATGCTTTTGGGGTGATACTTTTGGAACTTCTAACTGGAAGATGTGCTGGTGATGTGGTATCCGGTGAAGACGGAGGTGTGGATCTTACAGATTGGATAAGGTTGCGCGTATCTGAAGGTCGAGGCTCAGAATGTTTTGATGCTATCTTGATGCCAGAAATGAGCAATTCAGTTGTAGAAAAGGGGATGAAGGAGGTCCTAGGAATAGCGATTCGATGCATTCGATCAGTTTCAGAAAGACCTGGCATCAAGACTATATATGAAGATCTTTCTTCTATATAG 3189 0.4283 MKLFRLLVLSLSFLSVVGQLPSQDILTLLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNMGLSADADLSVFSNLTKLVKLSMSNNFMSGKLPDNAADFKSLEFLDISNNLFSSPLPPEIGNFGSLQNLSLAGNNFSGRIPNSISDMASIKSLDLSRNSLSGALPASLTKLNNLVSLNLSHNGFTGKIPKGFDKISTLEKLDLHGNMLDGPLDVGFMFLSSVSYVDFSDNMLSNSDSRKQEFLPRISESIKHLNLSHNQLTGSLVGGAEQSIFQNLKVLDLSYNQMNGELPGFDFVYDLQVLKLSNNKFSGFIPNGLLKGDSLVLTELDLSANNLSGPLGMITSTTLGVLNLSSNGFTGELPPLTGSCAVLDLSNNKFEGNLSRMLKWGNIEFLDLSGNHLTGAIPEVTPQFLRLNYLNLSHNSISSSLPRVLAQYPKLSVLDISSNQLDGLLLADLLAMQTLQELHLENNMISGGINLSSSSGQSHLQILDLSHNQLNSYFPDEFGSLTDLRVLNIAGNNFSGSLPTSISDMSFLDSLDISENHFTGSLPNNMPKGLKNFNASQNDLSGVVPEILRNFSSSSFFPGNTKLRFPNGPPGSTISPAESSKRKSMTTVVKVIIIVSCVVALIILILLAVFIHYIRMSRSPPEYDTSKDIRARPQPVISGPIRASDRGGALVVSAEDLVSSRKGSPSAEISPDEKTAAVTGFSPSKHSHISWSPESGDSYTADSLARLDTRSPDRLIGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLDNGILLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPLTWAQRLKLAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDMNARVSDYCLHRLMTQAGTMEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVVSGEDGGVDLTDWIRLRVSEGRGSECFDAILMPEMSNSVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2663 1062 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lja6g2663 1062 Gene3D Transferase(Phosphotransferase) domain 1 859 1062 - -
Lja6g2663 1062 SMART LRR_typ_2 314 338 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 527 555 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 165 188 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 189 212 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 430 453 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 117 141 IPR003591 -
Lja6g2663 1062 SMART LRR_typ_2 504 526 IPR003591 -
Lja6g2663 1062 Pfam Protein tyrosine and serine/threonine kinase 785 982 IPR001245 GO:0004672|GO:0006468
Lja6g2663 1062 PANTHER - 6 1062 - -
Lja6g2663 1062 PANTHER OS07G0626500 PROTEIN 6 1062 - -
Lja6g2663 1062 Gene3D Ribonuclease Inhibitor 261 618 IPR032675 -
Lja6g2663 1062 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Lja6g2663 1062 ProSiteProfiles Protein kinase domain profile. 781 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2663 1062 MobiDBLite consensus disorder prediction 726 744 - -
Lja6g2663 1062 Pfam Leucine Rich repeat 267 280 IPR001611 GO:0005515
Lja6g2663 1062 Pfam Leucine Rich repeat 292 307 IPR001611 GO:0005515
Lja6g2663 1062 SUPERFAMILY L domain-like 43 380 - -
Lja6g2663 1062 SUPERFAMILY Protein kinase-like (PK-like) 784 1059 IPR011009 -
Lja6g2663 1062 Gene3D Phosphorylase Kinase; domain 1 773 858 - -
Lja6g2663 1062 MobiDBLite consensus disorder prediction 707 744 - -
Lja6g2663 1062 SUPERFAMILY RNI-like 291 597 - -
Lja6g2663 1062 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Lja6g2663 1062 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Lja6g2663 1062 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Lja6g2663 1062 Gene3D Ribonuclease Inhibitor 187 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2663 Lja-Chr6 55660032 55664753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2663 1 1050 Receptor kinase-like Gene Family AT1G55610 26.898 7.26e-81 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja6g2663 PK_Tyr_Ser-Thr 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2663 - - gmx:100793639 1706.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2663 6 55660032 55664753 Lja6g2663 6 55660032 55664753 ECH