Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2657 ATGGGGAAGATCACTGGGGAGGGGCTTTTGATTGTGCTGATTCTGGTGGCAGTGAGTACTACTGATGCTCAACCAAAATCACTTCTTATAAACTGTGGTTCAAATTCTTCTGTAAATGTTGATGGTAGGAGATGGGTTGGGGACATGGCCTCTAATACCAATGTTACCCTAAGCTCCCCTGGTGTTGCTGTTTCCACTTCTACATTAAGTGGCAATTCAATCTATGATCCCCTCTACAAAACAGCCAGAATTTTCACAGCTTCTCTAAATTACACAGTGAAAGAAGTTCAGGGAAACTACTTTGTTAGGTTCCATTTCTGCCCCTTTGAGACTGGGGAGGACTTCAATGTAAATAAGTCCTCATTTGGTGTTGTGGTCAATGGTCTGAAACTATTGTCAGAGTTTGATGTTCCAGGTATGATATCCCACAAGAACATGGACTTGCAGAGTTCTGGAAAGAATGCTAGTTCATTCTTCTTGGTTAAAGAGTATATTCTGGCTGTGAATGTGGATTTGCTTGTGATTGAGTTTGTTCCAACTGGAGGCTCATTTGGCTTCATCAATGCCATCGAGATTGTCCCGGTTGTAGGTGAGCTTTTTGATGGCTCAGTCAGTAAAGTTGGTGGAGGTGGTGGAAATTTGAATTTGAATGGACGTGCGATGGAGACTATGTACAGGTTAAATGTTGGTGGCCCTGAGATTCAATCTGATCAGGATCCTGATCTTTGGAGAACTTGGGAAGTGGATTCTAGCTACATGATCACAGAAAATGCTGGTTCAGCAATTAAGAACCATTCTAACATCACATATGCTTCCATGAAGGACACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCTATGTCCAACACTCAAGTCCTGGAAAAAAGATTTAACATGTCATGGAAATTTGAAGTAGATCCTGATTTTGATTATTTGGTCCGGTTACATTTCTGTGAGCTGGATTATGATAAGGCAAATGAGAGAATATTCAGGGTCTACATAAACAACAGGACAGCTATGGGTAATGTTGATATCTTCGTACGAGCAGGAGGGATGAATAAAGCATATCACCAGGATCATTTTGATACCGTGTCGTCGAGGATTGACAACCTTTGGGTTCAGCTTGGTCCTGAGACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTCTTGAGATTTTCAAGCTTAGCCGAAATGGTAATCTTGCCCATGTGGAGAGATTTGACTCAGCTGACAATTTGGTAGGCAAATCAAAAGCAAGAATTTGGGTGGGAATAGGAGCAGGTCTAGCTTCTATTGCTGTAGTTGCTGGTATAGTTCTTGTTTTGTGTTTCTGCAAACGCAGGAGGAAAGAATCAATAGATACCAAAAACAACCCTCCAGGTTGGAGACCATTGTTCCTGTATGGTGGGATAAACAGTACTGTGGGTGCCAAGGGATCAGCAGGAACTCAGAAGTCATATGGACCGGCCGCCTCAACCAGAGCCGGCAAGCGGTTTACATTGGCGGAAATTATTGCTGCAACAAATAATTTTGATGAGAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGTGAGATTGATGATGGTATCCCAGCTGCGATTAAGCGTGCCAACCCTCATTCTGATCAAGGTCTGGCTGAATTCGAGACAGAAATTGAGATGCTCTCAAAACTCAGGCACAGGCATCTGGTGTCCTTGATCGGTTTCTGTGAAGAGAAAAATGAAATGATTTTGGTTTATGAGTACATGGCCAATGGAACGCTTAGAAGTCATCTATTTGGGAGTGATCTTCCTCCATTAACTTGGAAGCAGCGCGTAGAAGCATGCATTGGTGCCGCGAGGGGACTTCACTACCTTCACACCGGAGCTGACCGCGGAATAATTCACCGCGATGTCAAGACAACCAATATATTGCTGGATGAGAATTTCGTAGCCAAAATGGCCGATTTTGGTTTGTCAAAAGATGGACCTGCATTTGAGCATACCCATGTTAGCACTGCAGTGAAAGGAAGTTTCGGCTATCTCGACCCGGAGTACTTCAGAAGACAGCAACTGACTGAGAAATCTGATGTTTACTCTTTCGGGGTTGTGCTGTTTGAAGCTGTTTGTGCTAGAGCTGTGATAAACCCCACCTTGCCGAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAACGGCAGAGATCACTCGACACAATCATTGATGCACGACTCAAAGGAAGTTACTGCCCTGAATCCTTGTCGAAGTTTGCCGAGATCGCCGAGAAATGTCTTGCTGACGACGGGAAGAGCCGCCCCACCATGGGGGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTGCATGAAGCTTGGCTCAACCTGAAGAGCAATGAAACTTCTTTCTCTAGTAGTCAAGCTTTGAGAGGTATACAAGATGATGGAGGATTAGAAGTGGTGGTGCAGGAGCCTTCAAGTCACGATGAAGAGGTCGGTTTAGATCTCAAACAGAATTGA 2532 0.4439 MGKITGEGLLIVLILVAVSTTDAQPKSLLINCGSNSSVNVDGRRWVGDMASNTNVTLSSPGVAVSTSTLSGNSIYDPLYKTARIFTASLNYTVKEVQGNYFVRFHFCPFETGEDFNVNKSSFGVVVNGLKLLSEFDVPGMISHKNMDLQSSGKNASSFFLVKEYILAVNVDLLVIEFVPTGGSFGFINAIEIVPVVGELFDGSVSKVGGGGGNLNLNGRAMETMYRLNVGGPEIQSDQDPDLWRTWEVDSSYMITENAGSAIKNHSNITYASMKDTSVAPLLVYETARAMSNTQVLEKRFNMSWKFEVDPDFDYLVRLHFCELDYDKANERIFRVYINNRTAMGNVDIFVRAGGMNKAYHQDHFDTVSSRIDNLWVQLGPETAAGAAGTDALLNGLEIFKLSRNGNLAHVERFDSADNLVGKSKARIWVGIGAGLASIAVVAGIVLVLCFCKRRRKESIDTKNNPPGWRPLFLYGGINSTVGAKGSAGTQKSYGPAASTRAGKRFTLAEIIAATNNFDESLVIGVGGFGKVYKGEIDDGIPAAIKRANPHSDQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRVEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWAMRWQRQRSLDTIIDARLKGSYCPESLSKFAEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNLKSNETSFSSSQALRGIQDDGGLEVVVQEPSSHDEEVGLDLKQN* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2657 843 Pfam Protein tyrosine and serine/threonine kinase 522 785 IPR001245 GO:0004672|GO:0006468
Lja6g2657 843 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Lja6g2657 843 Gene3D Phosphorylase Kinase; domain 1 482 592 - -
Lja6g2657 843 PANTHER OSJNBA0058K23.13 PROTEIN 17 823 - -
Lja6g2657 843 ProSiteProfiles Protein kinase domain profile. 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2657 843 CDD STKc_IRAK 523 788 - -
Lja6g2657 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Lja6g2657 843 SMART serkin_6 517 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2657 843 Gene3D - 219 402 - -
Lja6g2657 843 Gene3D - 27 195 - -
Lja6g2657 843 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Lja6g2657 843 PANTHER OS07G0166700 PROTEIN 17 823 IPR045272 GO:0004714|GO:0006468
Lja6g2657 843 Pfam Malectin-like domain 30 400 IPR024788 -
Lja6g2657 843 Gene3D Transferase(Phosphotransferase) domain 1 593 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2657 Lja-Chr6 55591694 55594947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2657 7 835 Receptor kinase-like Gene Family AT1G30570 65.588 0.0 1114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja6g2657 Malectin_like 1.6e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2657 - - gmx:100791403 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2657 6 55591694 55594947 Lja6g2657 6 55591694 55594947 ECH