Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2647 ATGAAGCTGATATTTTTATCAGACTTATGCACCTACAACATTGGCAGCAGCTCGAGACTTTGGGACACATATACTACGACTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACTTCTTCAACTGGTGGTTCCACAGGGCCTCCTCCCTCAAACTTCATAAGAGCTGAAATGCTTCCTAGTGGCTATCTAATTAGACCTTGGGAGGGTGGTGGATCCATAATTCACATTGTTGATCACATAGATTTAGATGTCTGGAGTGTTCCTGAAGTGCTGAGGGCCCTATATGAATCATCAAAGATCTTGGCTCAGAAAATGACTATTGCTGCCCTGCAACATATAAGACAGATAGCACAGAAGTCCAGCGGAGAAATTCAGTATGGTGGGGGACGTCAACCAGCTGTCTTAAGGACATTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTGGATGATGGTTGGTCAATGCTGGGTCATGATGGGGCGGAAGATGTGACTATAACCATAAACTCTACCCCCAACAACTTCTTGGGGTCCAATTACAATTCGTCAATGTTCCCAGAGCATGTGGAGGCGGGGTCTTGTGTGCTAAAGCATCAATGCTACTGCAGGGAGCATAGATTAGAGTGGGCTGATTATGGGGTTGATGCTTACTCTGCCGCTTGTCTTAAGGCTAGTCCCTATGCAGTTCCTTGTGCAAGACCCGGTGGTTTCCCCAGCACTCAGGTTATTTTACCACTTGCTCATACCATTGAGCACGAGGAGTTCCTGGAGGTAGTTCGAATAGAGGGCCATGCATTCGACGTAGCATTAGCACGTGATATGTATCTATTGCAGCTATGCAGTGGAGTTGATGAAAATGCAATTGGGGCATGTGCACAGCTGGTGTGCCGTATTGAATGGGAGATAAGGGAAGAAGAAAAAGAACAGAGGAGGAAGAATGACTCTGCTGGTGTGAACTGGGCTTATGTAGTAGGTCCGGCCCATAATAGCTCAGATAATAAGGAGAATGAACAGTAA 1041 0.4573 MKLIFLSDLCTYNIGSSSRLWDTYTTTLEDGSLVICERSLTSSTGGSTGPPPSNFIRAEMLPSGYLIRPWEGGGSIIHIVDHIDLDVWSVPEVLRALYESSKILAQKMTIAALQHIRQIAQKSSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSMLGHDGAEDVTITINSTPNNFLGSNYNSSMFPEHVEAGSCVLKHQCYCREHRLEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFDVALARDMYLLQLCSGVDENAIGACAQLVCRIEWEIREEEKEQRRKNDSAGVNWAYVVGPAHNSSDNKENEQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2647 346 SUPERFAMILY Bet v1-like 24 122 - -
Lja6g2647 346 Pfam START domain 25 117 IPR002913 GO:0008289
Lja6g2647 346 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 304 IPR044830 GO:0003700
Lja6g2647 346 ProSiteProfiles START domain profile. 1 101 IPR002913 GO:0008289
Lja6g2647 346 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX32 2 304 - -
Lja6g2647 346 Gene3D - 8 127 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2647 Lja-Chr6 55401765 55403648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2647 1 303 Homeobox Transcription Factor Family AT2G34710 67.290 1.37e-150 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2647 K09338 - pop:7485133 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2647 6 55401765 55403648 Lja6g2647 6 55401765 55403648 ECH