Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2646 ATGGCTGTAATAATGTGGCGGGCTATTACGGGATTGATTATATTATGTGCTTCACTGATCCATGCAGCAGTCCCAGTCCCAAATGGGACTGTTGCTGCTGACTTGCTCAGTCCCGATTATTATAAAGACACATGCCCCCAACTGTACCATACCCTATCCGGTGTGATCCTCACCGCCGTTAAGACTGATATACGCATCGCTGCAAGTCTCTTGAAGCTTCACTTCCTTGATTGCTTCGTTCAGGGATGCGATGGATCAATATTGCTGGTCGAAACTGCCAAGATACGAAGTGAGCAAAGAGCATCTCACAACATGCACACAGTGAGGGGGTTGAATGTGGTGTATGATATTAAGCGTGCGGTGGAAGCAGTATGTCCGGCTACAGTATCATGTGCTGATATTCTTGCGTTATCTGCGCAAGTCGCTTCTGTTGTGGGAGGAGGTCCCACGTGGCAGGTTCCACTGGGAAGAAGAGACAGTTTGACGGCAAATAAGTTTCTCGCCAATCAAAATATTCCAGGAGTAGCCTTCACAGTGGATTATCTCAAGAATTCTTTTGCGGCCCAAGGTCTCACCACCACGGATCTAGTTGCCCTCTCAGGTGCCCATACGATTGGAAGAGCTCACTGCAGAACTTTCATGGACCGTTTGTACGATTTCTCTGGGAACCCTGACCCCAGTATGGACAGCACATACTCAGATTCATTGCGTGCTTTATGTCCTCGAGATGGATCTGGGGCCAATTACGAGACCTATTTGGACTTCTCTTCCCCAGATATTTTTGATAACGGTTATTACATGGGCCTCCAAGTAAACCAGGGTTTACTACATACGGATCAAGAGTTGTATTCATCCACTAATGCAGACACTGCCATGCTTGTCTCCAACTTCAGTAGCGATCAAAAACTATTCTTTGATCAATTTGTTGAATCAATGATCAAGATGAGTAGGATCGGTGTGCTAACGGGCAGTGATGGGGAGATCAGGCATCAGTGTGATTTTGTCAATGCTGGCATTCGCTTCCCCTTCTCCTACTTTTGGTTGTTTTGGACTGTATTAGTTACTTATATATGTATTACTTTATGTTAG 1089 0.4573 MAVIMWRAITGLIILCASLIHAAVPVPNGTVAADLLSPDYYKDTCPQLYHTLSGVILTAVKTDIRIAASLLKLHFLDCFVQGCDGSILLVETAKIRSEQRASHNMHTVRGLNVVYDIKRAVEAVCPATVSCADILALSAQVASVVGGGPTWQVPLGRRDSLTANKFLANQNIPGVAFTVDYLKNSFAAQGLTTTDLVALSGAHTIGRAHCRTFMDRLYDFSGNPDPSMDSTYSDSLRALCPRDGSGANYETYLDFSSPDIFDNGYYMGLQVNQGLLHTDQELYSSTNADTAMLVSNFSSDQKLFFDQFVESMIKMSRIGVLTGSDGEIRHQCDFVNAGIRFPFSYFWLFWTVLVTYICITLC* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2646 362 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601|GO:0042744
Lja6g2646 362 PANTHER PEROXIDASE 29 343 - -
Lja6g2646 362 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Lja6g2646 362 ProSiteProfiles Plant heme peroxidase family profile. 35 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 Pfam Peroxidase 57 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 Gene3D Peroxidase, domain 2 173 315 - -
Lja6g2646 362 Gene3D - 40 336 - -
Lja6g2646 362 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 PANTHER PEROXIDASE 72-RELATED 29 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2646 362 SUPERFAMILY Heme-dependent peroxidases 36 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2646 Lja-Chr6 55399185 55401412 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2646 1 337 Peroxidase AT5G06720 48.673 1.29e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2646 K00430 - aprc:113852209 376.711