Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2643 ATGGACCGTCTGTACGATTTCTCTGGGAACCCTGACCCCAGTATGGACAGCACATACTCAGATTCATTGCGTGCTTTATGTCCTCGAGATGGATCTGGAGCCAATTACGAGACCTATTTGGACTTCTCTTCCCCAGATATTTTTGATAACGATTATTACATGGGCCTCCAGAGAGTTATGGCTGTAATAATGTGGCGGGCTATTACGGGATTGATCATATTATGTGCTTCACTGATCCATGTAGCAGTCCCAGTCCCAAATGGGACTGCTGCTGCTGACTTGCTCAGTCCCGATTATTACAAAGACACATGCCCCCAACTGTACCATACCCTATCCGGCGTGATCCTCACCGCCGTTAAGACTGATATACGCATCGCTGTAAGTCTCTTGAAGCTTCACTTCTTTGATTGCTTCGTTCAGGGATGCGATGGATCAGTATTGCTGGTCGAAACTGCCAAGATACAAAGTGAGCAAGGTGCATTTCCCAACATGTACATAGTGAGGGGGTTGAATGTGGTGAATGATATTAAGCGTGCGGTGGAAGCGGCATGTCCAGCTACAATATCACGTGCTGGCATTCTTGCGTTATCTGCGCAAGTTGCTTCTATTGTGAAATGGCGACTTGTATATATATTTACAGGGAGGAGGTCCCACGTGACAAGTTCCACTGGGAAGAAGGGACAGCTTGAAGGCAAATAA 699 0.4678 MDRLYDFSGNPDPSMDSTYSDSLRALCPRDGSGANYETYLDFSSPDIFDNDYYMGLQRVMAVIMWRAITGLIILCASLIHVAVPVPNGTAAADLLSPDYYKDTCPQLYHTLSGVILTAVKTDIRIAVSLLKLHFFDCFVQGCDGSVLLVETAKIQSEQGAFPNMYIVRGLNVVNDIKRAVEAACPATISRAGILALSAQVASIVKWRLVYIFTGRRSHVTSSTGKKGQLEGK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2643 232 Gene3D - 95 231 - -
Lja6g2643 232 PRINTS Plant peroxidase signature 128 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PRINTS Plant peroxidase signature 104 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PRINTS Plant peroxidase signature 168 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PRINTS Plant peroxidase signature 187 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PANTHER PEROXIDASE 72-RELATED 2 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 Gene3D Peroxidase, domain 2 1 65 - -
Lja6g2643 232 SUPERFAMILY Heme-dependent peroxidases 2 59 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PANTHER PEROXIDASE 72-RELATED 69 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 PANTHER PEROXIDASE 2 59 - -
Lja6g2643 232 PANTHER PEROXIDASE 69 221 - -
Lja6g2643 232 SUPERFAMILY Heme-dependent peroxidases 95 222 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 ProSiteProfiles Plant heme peroxidase family profile. 94 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 Pfam Peroxidase 116 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2643 232 ProSiteProfiles Plant heme peroxidase family profile. 1 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2643 Lja-Chr6 55325425 55327648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2643 1 64 Peroxidase AT4G08770 44.118 1.26e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2643 K00430 - aprc:113852209 141.739