Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2639 ATGAAGCTTCACTTCAGTGATTGCTTTATTCAGGGCTGCGATGCATCAGTATTGTTGGCCAACACGGCCAAGATAGATAGCGAGCGAGATGCAGAGCCAAACATATACATATTGAAGGGATTCAAAGATGTCAATGAAATAAAAAAAGCGGTGGAAGCAGCATGTCCGGCCACTGTTTCATGCGCTGACATCCTTGCGATTTCCGCAGAAATCGCTTCTGTTGTGGCAGGAGGTCCCACGTGGCAGGTTCCACTGGGAAGAAGGGACAGCTTGAAGGCATATAAGAAACTTGTCAACAAAAATTATCCAGAATTGACTTTCACTCTGGACGAGCTCAAAGCTGCTTTTGCAGCCAAGGGTCTCACCTATGTGGATCTAGTCGCTCTCTCTGGTGCTCATACATTTGGAAGAGCTCAGTGTAGATTTTTCAAGCACCGCCTCTACAACTTGTCCATGATTCCGGTGTACACTGGCCCCAATATGGATAGCTCATATTTGGACTCATTGCGTACCTTATGTCCCGAAGATGGAGGGGACGATTACGAGGCCTATTTGGACATATACAGTCCTGATGAATTTGACAATGGGTACTACAAGAGCCTGATTGCACAACATGGAACATTACAAACGGATCAGGAATTGTTCTCCTCTGATGCAGACACTGCCAACCTTGTCTCTAGCTTCAGCAGAGATCAGAAACTATTTTTTGATCAGTTTGTTGAATCAATGACAAAGATGAGCAGGCTGGGTGTATTGACGGATAATGACGGGGAGATCCGCCGCCACTGCAACTTGGTCAATGGTGCCACCGGCTTTCACTTTTTGTGGATTTGGTCATTTTTTACCTTATTCTATATATTTATCACTTCTTGTTAG 876 0.4498 MKLHFSDCFIQGCDASVLLANTAKIDSERDAEPNIYILKGFKDVNEIKKAVEAACPATVSCADILAISAEIASVVAGGPTWQVPLGRRDSLKAYKKLVNKNYPELTFTLDELKAAFAAKGLTYVDLVALSGAHTFGRAQCRFFKHRLYNLSMIPVYTGPNMDSSYLDSLRTLCPEDGGDDYEAYLDIYSPDEFDNGYYKSLIAQHGTLQTDQELFSSDADTANLVSSFSRDQKLFFDQFVESMTKMSRLGVLTDNDGEIRRHCNLVNGATGFHFLWIWSFFTLFYIFITSC* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2639 291 PANTHER PEROXIDASE 2 275 - -
Lja6g2639 291 Gene3D - 1 267 - -
Lja6g2639 291 PRINTS Haem peroxidase superfamily signature 125 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Haem peroxidase superfamily signature 59 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Haem peroxidase superfamily signature 77 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 Pfam Peroxidase 2 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PANTHER PEROXIDASE 72-RELATED 2 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 Gene3D Peroxidase, domain 2 103 246 - -
Lja6g2639 291 CDD secretory_peroxidase 3 266 IPR033905 GO:0004601|GO:0042744
Lja6g2639 291 SUPERFAMILY Heme-dependent peroxidases 2 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 ProSiteProfiles Plant heme peroxidase family profile. 1 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 125 135 IPR019793 -
Lja6g2639 291 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 200 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 58 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 77 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 39 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2639 291 PRINTS Plant peroxidase signature 124 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2639 Lja-Chr6 55275729 55277832 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2639 1 273 Peroxidase AT3G32980 48.188 8.31e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2639 K00430 - vra:106774868 302.367