Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2635 ATGAGATCTCTTAGTACTCTCATAGCTCTGTTGTGTGTAGTGGTTGTGTTTGGAGGACTAAGCTTGTCCTCAAATGCACAGCTTGATCCCTCGTTTTACAGGAACACTTGTCCTAAGGTTCATTCAATTGTACGAGAAGTTGTGAGGGAAGTTTCTAAGAAAGATCCTCGAATGCTTGCCAGTCTCGTCAGACTTCATTTCCATGACTGTTTTGTTCAAGGGTGTGATGCATCAATTTTGCTGAACAACACCAATACAATCTTGAGCGAACAACAAGCTTTTCCAAACAACAACTCCATAAGGGGTTTGGATGTTATCAACCAGATCAAGACATCAGTTGAAAGCGCTTGTCCTAACACCGTTTCTTGTGCTGATATTCTTGCCCTTGCTTCTGAAATTTCTTCCCGTCTGGCTAAAGGTCCTGATTGGAAAGTTCCCTTGGGAAGAAGGGATGGTCGAACAGCAAACCGTACTGCTGCTAATGAAAACCTTCCAGGTCCTTCCTTCTCTTTGGATCGACTTAAAAAAGCATTTGGTGATCAAGGTCTCAACACTAATGATCTAGTTGCGCTTTCAGGTGCTCATACATTTGGTAGAGCCAGTTGCTCTTTATTCGTTGATCGATTGTACAATTTCAACAAAACTGGGAAACCCGATCCAACCCTTGACACTAACTACTTGCAACAATTGCGCAAAATATGCCCCAACGGTGGACCTGGATCGACCCTCGCCAATTTTGACCCCACGACTCCGGATATATTAGATGAGAACTACTTCACCAATCTTCGCGCTAAAAAGGGGTTGCTTCAAAGTGACCAAGAGTTGTTTTCAACAAGTGGCGCAGACACGATTAGCATAGTCAACAAATTCAGCAGCAACCAAGCTGCTTTCTTTGAGAGCTTTGAGGCTGCCATGATTAAAATGGGCAACATTGGTGTGCTTACTGGGAACCGAGGAGAAATCAGAAAACATTGCAATTTTGTTAACCAAAAATCTGCTGAACTTGACTTGGGTTCTGAAGAATCATCAGAGGGTATGAGAGTAGTAATTATTGCTTTTTTCGGTCTGTGTGTGAACGTGTCTGCTTTGTGCTGTGTAGTGGTTATTGTGCTAATTGGAGCACCACCCTTCTCCGATGCTCAGCTAGATCCCTCGTTTTATAATAGTACTTGTTCAAATGTGCATTCAATTGTGCGTGAAGTGCTCATAAATGTTTCCAAATCTGATCCACGTATACTTGGCAGTCTCATGAGGCTCCACTTTCATGATTGTTTTGTTCAAGGTTGTGATGCATCAATCTTGCTAAACGATACCTCAACTGTCGTGAGCGAACAAGGAGCTGCGCCGAACAACAACTCCATCAGAGGCTTGGATGTTGTGAATCAGATCAAGACCGCAGTAGAAAATACTTGTCCCAACATTGTTTCTTGTGCTGATATTCTTGCACTTGCCGCTGAAATTTCATCTGTTCTGGCTAATGGTCCTGATTGGAAAGTTCCACTAGGAAGGAGAGATAGTTTAACAGCAAATCGCACCCTTGCTAATCAAAATCTTCCAGGTCCCAATTTCAACCTAACTCGACTTAAATCTGCATTTACGGCACAAAACCTCAACACTACAGATCTAGTTGCACTCTCAGGTGGTCATACATTTGGAAGAGGTCAATGCAGATTTTTTGTGGACCGATTATACAATTTTAGTGGCACTGGAAATCCCGATCCATCTCTCAACACAACTTATTTACAAACACTGCAATCAATATGCCCTAATGGTGGATCTGGTTCCACCCTTACTAATTTGGATCCATCCACTCCTGATACATTTGACTCTAAATACTACTCCAATCTTCAGGTAGGAAAGGGTTTGTTCCAAAGTGACCAAGAGTTGTTTTCCACAAGTGGTGCAGATACCATTGCTATCGTCAATAGTTTCAGCAGTAACCAAACTCGTTTCTTTGAAATCTTTAAGGCCTCAATGATAAAAATGGGTAACATTGGAGTGCTAACTGGATCTCAAGGAGAAATCAGAAAACAATGCAACTTTGTCAATGGGAATTCTGTTGGATTGGCTACTCTGGCCACCGAGGAATCATCAGATGATGGCATGTTTAGCTCAATCTAA 2121 0.4224 MRSLSTLIALLCVVVVFGGLSLSSNAQLDPSFYRNTCPKVHSIVREVVREVSKKDPRMLASLVRLHFHDCFVQGCDASILLNNTNTILSEQQAFPNNNSIRGLDVINQIKTSVESACPNTVSCADILALASEISSRLAKGPDWKVPLGRRDGRTANRTAANENLPGPSFSLDRLKKAFGDQGLNTNDLVALSGAHTFGRASCSLFVDRLYNFNKTGKPDPTLDTNYLQQLRKICPNGGPGSTLANFDPTTPDILDENYFTNLRAKKGLLQSDQELFSTSGADTISIVNKFSSNQAAFFESFEAAMIKMGNIGVLTGNRGEIRKHCNFVNQKSAELDLGSEESSEGMRVVIIAFFGLCVNVSALCCVVVIVLIGAPPFSDAQLDPSFYNSTCSNVHSIVREVLINVSKSDPRILGSLMRLHFHDCFVQGCDASILLNDTSTVVSEQGAAPNNNSIRGLDVVNQIKTAVENTCPNIVSCADILALAAEISSVLANGPDWKVPLGRRDSLTANRTLANQNLPGPNFNLTRLKSAFTAQNLNTTDLVALSGGHTFGRGQCRFFVDRLYNFSGTGNPDPSLNTTYLQTLQSICPNGGSGSTLTNLDPSTPDTFDSKYYSNLQVGKGLFQSDQELFSTSGADTIAIVNSFSSNQTRFFEIFKASMIKMGNIGVLTGSQGEIRKQCNFVNGNSVGLATLATEESSDDGMFSSI* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2635 706 PANTHER PEROXIDASE 72-RELATED 7 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PANTHER PEROXIDASE 72-RELATED 360 691 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 Gene3D Peroxidase, domain 2 519 662 - -
Lja6g2635 706 Gene3D Peroxidase, domain 2 165 308 - -
Lja6g2635 706 CDD secretory_peroxidase 381 682 IPR033905 GO:0004601|GO:0042744
Lja6g2635 706 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Lja6g2635 706 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lja6g2635 706 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 SUPERFAMILY Heme-dependent peroxidases 381 683 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 Gene3D - 386 683 - -
Lja6g2635 706 ProSiteProfiles Plant heme peroxidase family profile. 381 683 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PANTHER PEROXIDASE 7 336 - -
Lja6g2635 706 PANTHER PEROXIDASE 360 691 - -
Lja6g2635 706 Gene3D - 32 329 - -
Lja6g2635 706 PRINTS Plant peroxidase signature 615 632 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 415 435 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 493 508 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 599 614 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 474 484 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 540 552 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 391 410 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 455 468 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Plant peroxidase signature 657 670 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Haem peroxidase superfamily signature 601 616 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Haem peroxidase superfamily signature 475 492 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Haem peroxidase superfamily signature 413 427 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Haem peroxidase superfamily signature 493 505 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 PRINTS Haem peroxidase superfamily signature 541 556 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 Pfam Peroxidase 44 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 Pfam Peroxidase 399 646 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2635 706 ProSitePatterns Peroxidases proximal heme-ligand signature. 541 551 IPR019793 -
Lja6g2635 706 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2635 Lja-Chr6 55145772 55183418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2635 366 684 Peroxidase AT5G06720 59.813 1.10e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2635 - K00430 aprc:113852209 911.368