Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2634 ATGGTTTACAGAGTGGGTGTTGTAGTGGTGGCACTTTTGTCAGTTTTGTGTGCAGTTGTGATGCATAATGCAATGTTTTCAGTCCCAAATGCTCAGCTCAGTCCAACTTTCTACAGTCAAACATGTCCATTTCTCTACCCTATTGTGTACAGAGTCATCTTCACTGCCTCATTCAGTGACCCCCGTATCGGTGCCAGCCTCATGAGGCTTCATTTTCATGACTGCTTTGTTCAAGGTTGTGATGGATCGGTTTTGTTGAACAACAGTGCAACTATAGAAAGCGAGCAATTTGCTTTGCCAAATAACAACTCATTGAGGGGTTTGGATGTGGTCAATAACATCAAGACTGCAGTTGAAACTCTTTGTCCAGGGAGAGTTTCATGTGCTGATATTCTTGCTATAGCAGCTCAAGTTGCCTCTGTTTTGGGAGGAGGTCCCTCATGGACAATTCAACTGGGAAGAAGAGATAGCTTAACGGCAAGTCCAACTCTTGCAAATCAAAACCTTCCAGCACCCTTCTTCACACTGGATCAACTTAAAGCTTCCTTTGCTGCTCAAGGTCTCAACACTTCTGATTTAGTTGCACTTTCAGGTGCTCATACATTTGGAAGAGCTCAGTACAGAAATTTTGTTGACCGATTATACAATTTTAGTGGCACTGGAAATCCTAATCCAACTTTAGACACTACTTACTTGGTAACATTGCGTGCGGCGTGTCCCCAAAATGGAGATGGGAATAACCTCGCAAATTTGGACCTGACTACACCAAATCAATTTGATAAGAAGTTTTATTCAAATCTTCAGATCCAAAAGGGTTTGCTTCAGAGCGACCAAGAGCTATTCTCTACTAGCGGCGCAGATACCATTGCCATTGTGAATAGCTTCAGTAGTGACCAGAGTCTCTTCTTTAACAAATTTAGTGCGTCAATGATAAAAATGGGTAACATTAGTGTTTTAAGTGGGAATAACGGAGAAATACGACAACAGTGCAATTTTGTGAATGGAAACTCGTATGGACTAGCGGGTGGTGTTGTATCCAAAAACTCAAAAGATGTCTCAATCTAA 1065 0.4178 MVYRVGVVVVALLSVLCAVVMHNAMFSVPNAQLSPTFYSQTCPFLYPIVYRVIFTASFSDPRIGASLMRLHFHDCFVQGCDGSVLLNNSATIESEQFALPNNNSLRGLDVVNNIKTAVETLCPGRVSCADILAIAAQVASVLGGGPSWTIQLGRRDSLTASPTLANQNLPAPFFTLDQLKASFAAQGLNTSDLVALSGAHTFGRAQYRNFVDRLYNFSGTGNPNPTLDTTYLVTLRAACPQNGDGNNLANLDLTTPNQFDKKFYSNLQIQKGLLQSDQELFSTSGADTIAIVNSFSSDQSLFFNKFSASMIKMGNISVLSGNNGEIRQQCNFVNGNSYGLAGGVVSKNSKDVSI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2634 354 Pfam Peroxidase 55 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 Gene3D Peroxidase, domain 2 170 313 - -
Lja6g2634 354 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 ProSiteProfiles Plant heme peroxidase family profile. 32 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 SUPERFAMILY Heme-dependent peroxidases 32 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Lja6g2634 354 PANTHER PEROXIDASE 72-RELATED 11 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2634 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lja6g2634 354 Gene3D - 37 334 - -
Lja6g2634 354 PANTHER PEROXIDASE 11 342 - -
Lja6g2634 354 CDD secretory_peroxidase 32 333 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2634 Lja-Chr6 55105664 55119591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2634 13 335 Peroxidase AT5G06720 58.204 4.51e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2634 K00430 - vra:106774868 495.738