Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2633 ATGGTTTCTACAAATCGTGTTGTAGTAGTGGCACTTTTGTGTGCAATTGTGATGCATAATGCAGTGTTTTCAGTCTCAAATGCTCAGCTCACTCCAACTTTCTACAGCCTAACATGTCCATTACTCTACACTACTGTGTCCACAGTCATCTCCACTGCCTCACTCACCGATCCCCGTATCGGTGCTAGCCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAAGCAACTATAGAAAGTGAGCAATTTGCTTTTCCAAATAACAACTCATTAAGGGGTTTGGACGTTGTCAATAACATCAAGACTGCAGTTGAAAATCTTTGTCCATGTACAGTTTCACGTGCTGATATTCTTGCTATATCAGCTCAAGTTGCCTCTGTTCTGGGAGGAGGTCCCTCATGGACAATTCAACTGGGAAGAAGGGATAGCTTAACGGCAAATCAAACCCTTGCAAATCAAAACCTTCCAGCACCCTTCTTCACATTGGATCAACTTAAAGCTTCTTTTGCTGCTCAAGGACTCAACACTACTGATTTAGTTGCACTCTCAGGTGCTCATACATTTGGAAGAGCTCACTGCAGAAATTTTATTGACCGATTATACAATTTCAGCAACACTGGAAATCCTGACCCAACTTTGGACACTACTTACTTGGAAACACTGCGTGAGATGTGTCCCGAAAATGGAGATGGCCTCGTCAATTTCGACCTCACCACACCTAATCAATTTGATAAGAAGTTCTATTCCAATCTTCAAATCCAAAAGGGTTTAGTTCAGAGCGACCAAGAGCTATTCTCCACTTGTGGTGCGGATACCATTGCCATTGTGAATAGCTTCAGTTGTGACCAGAGTCTCTTCTTTGACAAATTTAGTGCATCGATGATAAAAATGGGTAATATTGGAGTGTTAACAAGGAATAATGGAGAAATACGATCACAATGCAACTTTGTGAATGAGAACCCGTATGGACTAGTTGGTGGTGCTGCATCCAAAGATTCACAAGATGTTTCAATCTAA 1017 0.4149 MVSTNRVVVVALLCAIVMHNAVFSVSNAQLTPTFYSLTCPLLYTTVSTVISTASLTDPRIGASLMRLHFHDCFVQATIESEQFAFPNNNSLRGLDVVNNIKTAVENLCPCTVSRADILAISAQVASVLGGGPSWTIQLGRRDSLTANQTLANQNLPAPFFTLDQLKASFAAQGLNTTDLVALSGAHTFGRAHCRNFIDRLYNFSNTGNPDPTLDTTYLETLREMCPENGDGLVNFDLTTPNQFDKKFYSNLQIQKGLVQSDQELFSTCGADTIAIVNSFSCDQSLFFDKFSASMIKMGNIGVLTRNNGEIRSQCNFVNENPYGLVGGAASKDSQDVSI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2633 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Lja6g2633 338 Pfam Peroxidase 48 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 CDD secretory_peroxidase 29 317 IPR033905 GO:0004601|GO:0042744
Lja6g2633 338 Gene3D Peroxidase, domain 2 156 297 - -
Lja6g2633 338 ProSiteProfiles Plant heme peroxidase family profile. 29 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lja6g2633 338 Gene3D - 34 318 - -
Lja6g2633 338 PANTHER PEROXIDASE 72-RELATED 7 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PANTHER PEROXIDASE 7 325 - -
Lja6g2633 338 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2633 338 SUPERFAMILY Heme-dependent peroxidases 29 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2633 Lja-Chr6 55099414 55101957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2633 12 318 Peroxidase AT5G06720 54.688 5.60e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2633 K00430 - gmx:548068 457.218