Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2621 ATGCTATCTCTAAATGTGGTTCCACCCTCTTCCTCTGTCACTTTCAGCAAACCAAATCACCAATTTTCCATTAATGCTCACCCCATTCTCAAACCAAATCTTCTCAGAAGGTTCCACAGAGCCACTTCTCAGCTTCATGAATCAGCTTTCAAAACCTCCAACCTTTCTCTCACACCCACATCTCAGATCCATCCTCCAATCACAAAGTTAAAATCTTTCACCAGATTCCCCTCACTCTCATTTGATTCCTCTGCTAGAATCAGACACCAGATTGTTAAAGCAGCACCTGATGCTGATGCCAATCCTGAGGGAGAGAGTCCAGCAGCAGCTCCTATTGTTCCAAAATCCAAGAATCTCAAACTAGCTCTTGTCTTTGGGCTATGGTACTTCCAGAACATTGTCTTCAACATTTACAACAAGAAGGCCTTAAACATATTCCCATTCCCATGGTTCCTTGCCTCCTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTCTGGTCTTTGAAGCTCCAACCTTGTCCCAAAATCTCAAAATCCTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCTAAAGTTGCTGTGTCCTTCACACATGTCATCAAGTCTGCAGAACCAGTTTTCTCTGTCATTTTCTCTTCTGTGCTTGGTGATAGGTACCCCATTCAGGTTTGGCTGTCCATTCTACCTATTGTGTTTGGTTGTTCTTTAGCTGTTGTTACTGAGGTTACTTTCAATATGCAAGGATTGTGGGGTGCCCTCATTAGCAATGTTGGTTTTGTGTTGAGGAACATTTACTCTAAAAGAAGCTTGCAGAATTTCAAGGAAGTTGATGGCTTAAACTTATATGGATTTATTACTATACTTTCACTGTTCTACTTGTTTCCAGTGGCTATTTTTGTTGAAGGGTCTCAGTGGATCCCAGGGTATTACAAGGCAATTGAAACTATAGGCAAACCATCCACATTTTATATATGGGTTTTGGTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCCTTGGATGAAATTAGCCCTTTAACTTTCTCTGTGGGAAACACTATGAAGAGAGTGGTGGTGATTGTGGCTACTATTTTGGTGTTCAGGAATCCGGTTAGGCCTCTTAATGGCCTTGGTTCTGCCATAGCGATTCTCGGGACATTCCTGTATTCTCAGGCAACATCTGCAAAGACAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1281 0.4208 MLSLNVVPPSSSVTFSKPNHQFSINAHPILKPNLLRRFHRATSQLHESAFKTSNLSLTPTSQIHPPITKLKSFTRFPSLSFDSSARIRHQIVKAAPDADANPEGESPAAAPIVPKSKNLKLALVFGLWYFQNIVFNIYNKKALNIFPFPWFLASFQLFVGSIWMLVLWSLKLQPCPKISKSFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVFGCSLAVVTEVTFNMQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGFITILSLFYLFPVAIFVEGSQWIPGYYKAIETIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVATILVFRNPVRPLNGLGSAIAILGTFLYSQATSAKTAKKIEGEKSS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2621 426 PANTHER SOLUTE CARRIER FAMILY 35 33 422 - -
Lja6g2621 426 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 33 422 - -
Lja6g2621 426 Pfam Triose-phosphate Transporter family 119 409 IPR004853 -
Lja6g2621 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 307 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2621 Lja-Chr6 54985757 54987037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2621 23 424 Antiporters AT5G17630 67.711 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2621 K15283 - gmx:100779531 673.315